PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000198495
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bZIP
Protein Properties Length: 391aa    MW: 42754.3 Da    PI: 6.1993
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000198495genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.35.8e-12216266454
                    XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                     +++rr++kNRe+A rsR+RK+a++ eLe  v +Le+e  +L  +  e kk
  MDP0000198495 216 QQKQRRMIKNRESAARSRERKQAYTVELESLVTQLEEEXARLLRQQAEQKK 266
                    689************************************987655444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1014473.92E-5163173No hitNo description
SMARTSM003383.0E-10213277IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.668215267IPR004827Basic-leucine zipper domain
PfamPF001702.6E-10215267IPR004827Basic-leucine zipper domain
CDDcd147071.50E-21217266No hitNo description
SuperFamilySSF579595.77E-9217267No hitNo description
Gene3DG3DSA:1.20.5.1702.5E-11218267No hitNo description
PROSITE patternPS000360220235IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    Send to blast
MAASSKMVVV STTNSDLPRR ESICSLSTLM ADNDDDHRKH PSITMDDILK NIYSSTATND  60
MDDNDHHQQH QQHQHHAEXR SVDDVWKEIV AGGVGVGMGE EEEGTAEGDG GDQVRAGEGG  120
GGGGMEEMTL EDFLTRARAV REEDVNVTAS GVPIGYGQFQ VQPPPPPPPP PPPAAQGQLV  180
YANGTTSGGG GRGGGGGGRA GKRRVVQEAP LDKATQQKQR RMIKNRESAA RSRERKQAYT  240
VELESLVTQL EEEXARLLRQ QAEQKKERFK RVPGMGRKTL PVTDYGMAHG EPHSXRREAE  300
TTTXSSQSTF DALVDAVPPM LSAVIHTRNL HIGCPSSRLK GKPMVLDDGL IHTNVEXFEC  360
GIPMLIRLLV GDFRXWYTDV DPFTICKYVT K
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1189197GGRGGGGGG
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.169012e-63fruit
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008339289.20.0bZIP transcription factor 12-like
TrEMBLA0A498HVT60.0A0A498HVT6_MALDO; Uncharacterized protein
STRINGXP_008339289.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.18e-21bZIP family protein