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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MDP0000178782 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family |
bHLH |
Protein Properties |
Length: 361aa MW: 40816.1 Da PI: 4.3345 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MDP0000178782 | genome | GDR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 36.6 | 8e-12 | 195 | 238 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
++ErrRR+r+N++++ Lr+++Pk + K++ +iL +++Y+k+L
MDP0000178782 195 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 238
589*********************66......****************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 361 aa
Download sequence Send
to blast |
MELNEHSFLE ELLALRRDSR SSSTWETNIP TEMNDLLSSS GSWGNFDYFD QQXPSSSFFP 60 NSSSIHEFSP PFEPNFNNFN ATFNQEVYYP FGFGVTDEAL LSAQQQVTDS SYSTLDTPPF 120 LVXEDNPWSM LEEEELGLLG DEIHNLETQA EAAAACKVEP TQSPDQVPSF NVGICVERNT 180 RATNKKLQGQ PSKNLMAERR RRKRLNDRLS MLRSIVPKIS KMDRTSILGD TIDYMKELLE 240 RINNLQQEIE ADSDQLNVMS LFKDIKPNEM LVRNSPKFDV QRRNVDTKID ICCAGKPGLL 300 LSTVSTLEAL GLEIQQCVIS CFNDFAVQAS CSEDSDQRTL VTSEDIKQEL FRNAGYGGRC 360 V
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 197 | 204 | ERRRRKRL |
Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Broadly expressed. {ECO:0000269|PubMed:17088607}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269|PubMed:17088607}. |
Publications
? help Back to Top |
- Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. Differentiation, 2010. 80(1): p. 1-8 [PMID:20219281] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Sharma N, et al.
NO FLOWERING IN SHORT DAY (NFL) is a bHLH transcription factor that promotes flowering specifically under short-day conditions in Arabidopsis. Development, 2016. 143(4): p. 682-90 [PMID:26758694] - Chen YS, et al.
Two MYB-related transcription factors play opposite roles in sugar signaling in Arabidopsis. Plant Mol. Biol., 2017. 93(3): p. 299-311 [PMID:27866313] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]
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