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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MDP0000160256 |
Common Name | BHLH8 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family |
bHLH |
Protein Properties |
Length: 326aa MW: 36930.3 Da PI: 8.1183 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MDP0000160256 | genome | GDR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 39.6 | 9.3e-13 | 115 | 182 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC................TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkas.............kapskKlsKaeiLekAveYIksLq 55
+r++h +Er+RR+++N+ ++ Lr+l+P+++ ++++ + + a+i+ A++++k+L+
MDP0000160256 115 QRMTHIVVERNRRKQMNEYLAVLRSLMPQSYaprsyyrrevhehRTSNVRGDQASIVGGAINFVKELE 182
79***************************777*********************************995 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 326 aa
Download sequence Send
to blast |
MTLEAVVYPQ EYPFSFGCKD FYSFNGGGSW GSDFISQDQQ GNNEYWDYCS SSPSLLQNVK 60 DWDPNSSPEA CTVDQSCPSG QHLSAMEAPP QLATTSRRKR RRTKSSKNKE EIENQRMTHI 120 VVERNRRKQM NEYLAVLRSL MPQSYAPRSY YRREVHEHRT SNVRGDQASI VGGAINFVKE 180 LEQLFQSMNS NKRSKQQPLA DFFTFPQFST RATQNNNSAG VQANESNTTQ CNNNQWAAAD 240 IEVTMVDNHA NLKILSKKRP RQLLKMVAGF QSLRLSVLHL NVTTADEMVL YSVSVKIEEG 300 CPLNTVDEIA AAVNQMLRTI QEAAFS
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 97 | 101 | RKRRR |
2 | 97 | 102 | RKRRRT |
3 | 115 | 126 | RMTHIVVERNRR |
Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed constitutively in roots, leaves, stems, and flowers. {ECO:0000269|PubMed:12679534}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KP689429 | 1e-161 | KP689429.1 Prunus pseudocerasus isolate Unigene16433 bHLH transcription factor mRNA, complete cds. |