PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000155965
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bHLH
Protein Properties Length: 349aa    MW: 38773.1 Da    PI: 4.9977
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000155965genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH162.2e-052773191055
                    HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    r+RR++iN ++   r+l       +   ++ +++Le+Av+Y+k Lq
  MDP0000155965 277 RKRREKINARLRIYRTLYQME---QRAQVDISTMLEEAVQYVKFLQ 319
                    9*******************9...9********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.671267318IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.75E-7269330IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.6E-6274326IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.10E-6276323No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MESAAAIANG GWSSLGEMYS SDEEAEFMSQ LLANCCVTNE MNEASSSAIP FAICPSYDFS  60
KSNMEGIYQG SQYSSEIANL YFSNGNAYIM SNNETNHYTG NPNHIMETSY HSSEAFRPPD  120
ANATNLILFQ GKEYGMDHHQ ELSNVNIENQ PGAAIYEKLL QLNRESDHEM TIWEPAMENV  180
VMVSEGSKKR PCSSVDVQKK RTVKAKKGQK AVLRGNVEDN DITTKGQSSS SSCSVDDDSI  240
NASHQDLSGG VSTSSLSPKW KKASRGSATD SQGIYARKRR EKINARLRIY RTLYQMEQRA  300
QVDISTMLEE AVQYVKFLQL QIKLISSDDM WMFAPIAYNG INIGIDLNS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1276281RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028965006.10.0transcription factor bHLH84-like
TrEMBLA0A498JNG00.0A0A498JNG0_MALDO; Uncharacterized protein
STRINGXP_008367267.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80733121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.12e-40bHLH family protein