 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MDP0000151330 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
|
| Family |
LBD |
| Protein Properties |
Length: 335aa MW: 36899 Da PI: 8.9407 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MDP0000151330 | genome | GDR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 94.4 | 1.3e-29 | 2 | 103 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91
+C++C+vlr++C+++C+l+p + p++q +++ +v+k+FG++ ++++++a+p+++r+ +++sl++eA+ r+ +Pv+Gavg++++++++++q++
MDP0000151330 2 SCNGCRVLRKGCSDSCMLRPSLqwietPEAQGHATVFVAKFFGRAGLMSFISAVPDSQRPVLFQSLLFEACGRTINPVNGAVGLLWTGNWHVCQAA 97
6*********************************************************************************************** PP
DUF260 92 aelall 97
+e++l
MDP0000151330 98 VETVLX 103
998875 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 335 aa
Download sequence Send
to blast |
MSCNGCRVLR KGCSDSCMLR PSLQWIETPE AQGHATVFVA KFFGRAGLMS FISAVPDSQR 60
PVLFQSLLFE ACGRTINPVN GAVGLLWTGN WHVCQAAVET VLXGGTLRPI PELLGGASTP 120
DEASEADVGG VTISTDMWRL RDPSHNSGSS SRFTSSRSAR ASSPKRKRSA AXDESSTKLL 180
QPQQHADLDL RLTPTPSFKP KPKPETRRPG TPSMNSDESG VSTCFESGFE DQHPYSFILT 240
GHKPKXXXEQ AERNSHGTKK QRGNNPKTKP NPPRERRREX LEPKEQQHSN NGCGREAGRE 300
FLFGLVLLPS SLTPPQLAYN ELDQTLLPIN YYQPF
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in young shoots, roots, stems, leaves and flowers. {ECO:0000269|PubMed:12068116}. |
