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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MDP0000142237 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family |
bHLH |
Protein Properties |
Length: 258aa MW: 27960.3 Da PI: 7.9855 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MDP0000142237 | genome | GDR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 12.5 | 0.00028 | 180 | 218 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
R +++ +++ L +l+ + +K + a++L +A+ YI+ Lq
MDP0000142237 180 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 218
6678889999999999998.....8******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 258 aa
Download sequence Send
to blast |
MNRGGCQSSP VQQMMAGNPN WWSINSMRPP STQPSMNISP FFHPPSPLPP NFLIPQFAPN 60 NNNNTSPPSS TISSSGLAIP SWHIENNNQE LPESWSQLLL GGLVGEDEKG IMQSTTPSAA 120 SSPKSSCVTS FSNNNMLDFS SKSDVRHPPP HRSSDQCNNG GALKRARVQP SSTPTTFKVR 180 KEKLGDRITA LHQLVSPFGK TDTASVLLEA IGYIRFLQSQ IEALSLPYLG SGSGNMLQQP 240 QSVVQGERNC MFPEDPGQ
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT145010 | 3e-73 | BT145010.1 Lotus japonicus clone JCVI-FLLj-18O21 unknown mRNA. |