 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MDP0000139025 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
|
| Family |
LBD |
| Protein Properties |
Length: 215aa MW: 23786 Da PI: 7.6418 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MDP0000139025 | genome | GDR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 93.7 | 2.1e-29 | 2 | 103 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91
+C++C+vlr++C+++C+l++++ p++q++++ +v+k+FG+s + ++++a++e++r+++++sl++eA r+ +Pv+Ga+g++l+++++++q++
MDP0000139025 2 SCNGCRVLRKGCSDNCILRQCLqwmedPQAQAHATVFVAKFFGRSGLFSFINAVSESQRPALFQSLIFEAVGRTINPVNGATGLLLSGKWDVCQAA 97
6**********************************************************************************************9 PP
DUF260 92 aelall 97
e++l+
MDP0000139025 98 IETVLR 103
998876 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 215 aa
Download sequence Send
to blast |
MSCNGCRVLR KGCSDNCILR QCLQWMEDPQ AQAHATVFVA KFFGRSGLFS FINAVSESQR 60
PALFQSLIFE AVGRTINPVN GATGLLLSGK WDVCQAAIET VLRGGALEPL PEYIRDNHYV 120
REHQVRVEQR QSTKKKRPNF AVDDIEDDVA NFQPPDLNLC LTSAAGLTSM TKRRDCRAAT 180
PSVEDSETTT LGSSSSENNC TAGNLERTKL LRLFI
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in young shoots, roots, stems, leaves and flowers. {ECO:0000269|PubMed:12068116}. |
