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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MDP0000137325 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family |
bHLH |
Protein Properties |
Length: 513aa MW: 57516.1 Da PI: 6.9028 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MDP0000137325 | genome | GDR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 35.4 | 1.9e-11 | 323 | 369 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h e+Er+RR+++N++f Lr+++P+ K++ ++ L Av YI++L+
MDP0000137325 323 NHVEAERQRREKLNHRFYVLRSVVPNV-----SKMDRSSLLADAVAYINQLK 369
799***********************6.....5*****************95 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 513 aa
Download sequence Send
to blast |
MDEIISSCST NFCQETSPTF QQRLQFIVQN RPEWWVYSIF WQASKDSISD QVSLSWAGGH 60 FRNTRDHLAS KRSSRIANNY QLKFGFNNVE RKRVNNREVE SLLHDDMVDL DMRLVDHGDV 120 TDSEWFYFYT VSLTQSFSGS HGNNSTNILG RAFGSGGFVW LAGDHEFQFY ECERVKEARM 180 HGIQTLVCIA TPCGVLELAS LDVIKEDWGL VHLSKSLFGS DDNINMNNNN RLSKRQTSRD 240 GDVLVPILEN GLFSAAQKEL IPQDQGGGIN EAAPINLGGS SPESPSDSVG NFTSENTENT 300 IRSKKRGRSS KHGAANRESQ LLNHVEAERQ RREKLNHRFY VLRSVVPNVS KMDRSSLLAD 360 AVAYINQLKS KVQELEAKVQ EQPQKPKAGN NPSNNLDHHS SQSTSSIVDQ HHYSNKNNNS 420 INSSNSDRAA SAVMEVDVKI SASEAMIHVQ CPDEDYPYAK LMNALKSLGL QVYHASISSV 480 KELMIQDVVA RLPYGFIGGK EALRNGIIKG WYH
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
4rqw_A | 8e-24 | 19 | 218 | 8 | 192 | Transcription factor MYC3 |
4rqw_B | 8e-24 | 19 | 218 | 8 | 192 | Transcription factor MYC3 |
4rs9_A | 8e-24 | 19 | 218 | 8 | 192 | Transcription factor MYC3 |
4yz6_A | 8e-24 | 19 | 218 | 8 | 192 | Transcription factor MYC3 |
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