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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MDP0000133262 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family |
bHLH |
Protein Properties |
Length: 204aa MW: 23080.5 Da PI: 8.7915 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MDP0000133262 | genome | GDR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 42.1 | 1.6e-13 | 36 | 78 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
Er+RR+++N++++ Lr ++P+ + K++Ka+i + A+eYI++L
MDP0000133262 36 VSERNRRKKLNERLFALRAVVPNiS------KMDKASIIKDAIEYIQEL 78
57*********************66......****************99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 204 aa
Download sequence Send
to blast |
MAVVRGSWGL DEAFSGYYDS SSPDGAASSM ASKNIVSERN RRKKLNERLF ALRAVVPNIS 60 KMDKASIIKD AIEYIQELHE QERRIQTEIV ELESGKSNKN QGSDFEQDLP VLLRSKKKKI 120 DQIYDSEGSR TSTIEILELR VTYMGEKTVV VSLTCSKRTD TMVKLCEVFE SLKLKIITAN 180 ITSFNGRVLK TVFVEVSCFF LTTF
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5gnj_A | 2e-14 | 34 | 109 | 9 | 78 | Transcription factor MYC2 |
5gnj_B | 2e-14 | 34 | 109 | 9 | 78 | Transcription factor MYC2 |
5gnj_E | 2e-14 | 34 | 109 | 9 | 78 | Transcription factor MYC2 |
5gnj_F | 2e-14 | 34 | 109 | 9 | 78 | Transcription factor MYC2 |
5gnj_G | 2e-14 | 34 | 109 | 9 | 78 | Transcription factor MYC2 |
5gnj_I | 2e-14 | 34 | 109 | 9 | 78 | Transcription factor MYC2 |
5gnj_M | 2e-14 | 34 | 109 | 9 | 78 | Transcription factor MYC2 |
5gnj_N | 2e-14 | 34 | 109 | 9 | 78 | Transcription factor MYC2 |
Search in ModeBase |
Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed constitutively in roots, leaves, stems, and flowers. {ECO:0000269|PubMed:12679534}. |