 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MDP0000131454 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
|
Family |
HD-ZIP |
Protein Properties |
Length: 309aa MW: 34566 Da PI: 8.0838 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MDP0000131454 | genome | GDR | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 57.3 | 2.6e-18 | 139 | 193 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++keq Lee F++++++++++++eLAk+l+L rqV vWFqNrRa+ k
MDP0000131454 139 RKKLRLSKEQSLLLEETFKEHNTLNTKQKQELAKQLNLRARQVEVWFQNRRARTK 193
788899***********************************************98 PP
|
2 | HD-ZIP_I/II | 118.6 | 3.5e-38 | 139 | 228 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
+kk+rlskeq+ lLEe+F+e+++L++++K+ela++L+l++rqv+vWFqnrRARtk+kq+E+d+e Lkr++++l+e+n+rL+kev+eLr +l
MDP0000131454 139 RKKLRLSKEQSLLLEETFKEHNTLNTKQKQELAKQLNLRARQVEVWFQNRRARTKLKQTEVDCELLKRCCEKLTEDNRRLHKEVQELR-AL 228
69*************************************************************************************9.55 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 309 aa
Download sequence Send
to blast |
MSEKMKDMKG LGLGLGSSLS LGLKPNESEP CLQLNLMEKP SHPMQNHPHR TSWNEIFQFP 60 DRNPNTRSFI GGIDVNEAPS MADFEEENGI SSPNSTVSSL SGKRSDREPI VDENEGERTS 120 CSHGGGSDDE DGYGGDMSRK KLRLSKEQSL LLEETFKEHN TLNTKQKQEL AKQLNLRARQ 180 VEVWFQNRRA RTKLKQTEVD CELLKRCCEK LTEDNRRLHK EVQELRALKL SPHFYMQMNP 240 PTTLTMCPSC QRVAVSSSSS SAAVPASSTT LANAPTRQHG PPNIQRPIPI SPWAKLPIQH 300 PTLDASAPR
|
Nucleic Localization
Signal ? help
Back to Top |
 |
No. |
Start |
End |
Sequence |
1 | 137 | 143 | SRKKLRL |
2 | 187 | 195 | RRARTKLKQ |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |