PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000130173
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family BES1
Protein Properties Length: 429aa    MW: 45987 Da    PI: 8.0294
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000130173genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822159.42.5e-49277176
         DUF822  1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl 76
                   ++++r+ptwkErEnnk+RERrRRaiaakiy+GLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg  ++
  MDP0000130173  2 TSGTRMPTWKERENNKKRERRRRAIAAKIYSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGLAQK 77
                   5899*******************************************************************98765 PP
2DUF82244.75.1e-1417125271150
         DUF822  71 kgskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150
                    +g+kp ++++++g s+sasp+ss+q s+ +s+ +sp +sy++sp+sssfpsp+++  + + +a  +sl+p+l++ls+ sss+
  MDP0000130173 171 NGCKPVDRMDIMGGSTSASPCSSYQPSPCASYNPSPGASYNPSPASSSFPSPARYPANGNGNAdaNSLIPWLKTLSSGSSSA 252
                    59****************************************************99987766566**********9977765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.2E-46376IPR008540BES1/BZR1 plant transcription factor, N-terminal
PfamPF056875.4E-13171246IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MTSGTRMPTW KERENNKKRE RRRRAIAAKI YSGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WTVEEDGTTY RKGLAQKRDL CEKRVILLMD LPFLAKFVNA NLRQECVCGG GFEIVMEGTC  120
WGMACRGGAD NQLITCMHPL FDIIAPSFNC VFLLYLGAIS QITSVSPFLV NGCKPVDRMD  180
IMGGSTSASP CSSYQPSPCA SYNPSPGASY NPSPASSSFP SPARYPANGN GNADANSLIP  240
WLKTLSSGSS SATSKLPQLF VQGGSISAPV TPPLSSPTCR TPRTKSDWDE AVAGSNWAGQ  300
HYPFLPSSTP PSPGRQVLPD SGWLAGLQIP QSGPSSPTFS LVSRNPFNLK EALSGGGSRM  360
WTPGQSGTCS PAVAASIDHT GDVPMSDGMA AEFAFGSNTT GLVKPWEGER IEECVSDDLE  420
LTLGSTRTR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-20673372439Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-20673372439Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-20673372439Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-20673372439Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.62432e-94fruit| leaf| stem
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008371512.11e-166BES1/BZR1 homolog protein 4-like
RefseqXP_009351745.11e-166PREDICTED: BES1/BZR1 homolog protein 4-like
SwissprotQ9ZV888e-86BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A498JVF11e-165A0A498JVF1_MALDO; Uncharacterized protein
STRINGXP_009351745.11e-165(Pyrus x bretschneideri)
STRINGXP_008371512.11e-165(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.17e-73BES1/BZR1 homolog 4