PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000124536
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bHLH
Protein Properties Length: 456aa    MW: 50715.5 Da    PI: 6.3082
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000124536genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.26.3e-13256301454
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    +h +++r RR+++N++f++Lr+l+P++     +K++ a+i+  A+ YI++L
  MDP0000124536 256 KHLAIDRGRRQQLNDKFFTLRSLIPNP-----TKNDRASIVGDAIGYINEL 301
                    7999***********************.....9***************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.583252301IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.14E-14255320IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.20E-10255305No hitNo description
Gene3DG3DSA:4.10.280.107.2E-12255310IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.9E-10255301IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.0E-10258307IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 456 aa     Download sequence    Send to blast
MYQDTVSCNF DPNPLPPPPP PQQPQVLMEE LSFHHHHQNH HSSVEMELQN ELGFNVDNPY  60
NTTTDHDTNI NNSHLVSFEH PTNWDNNIHG VHDQIQQQFP DGTTSTPYPQ PPDLLNLFSL  120
PRCSPSSLLQ NSSITFTNTL PKTSTSFGFL GDLPSAVDTP LGTASSVLYD PLLHLNLPPQ  180
PPMFRELLQS LPHGYTLPGS GNGSLFSSGG DEREGSGGGI YPDHGTINGS IFENGVMEFS  240
REMGSIGRGR NLKGSKHLAI DRGRRQQLND KFFTLRSLIP NPTKNDRASI VGDAIGYINE  300
LLRTVDELKL LVEKKRCGTE RSKRHKTEQD GGAGDENCNA KSEPHDQSYN NGSLRSSWLQ  360
RKSKDTEVDI RIIHDEVTIK LVQRKKINLL LSVSRLLDEL QLDLHHVAGG HIGNSYSFLF  420
NTKMYEGSCL YASAIAGKFI EVLDRQYSAV PPTSSY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009373826.20.0PREDICTED: transcription factor bHLH10-like
RefseqXP_009373851.20.0PREDICTED: transcription factor bHLH10-like
TrEMBLA0A498KLS30.0A0A498KLS3_MALDO; Uncharacterized protein
STRINGXP_008345255.10.0(Malus domestica)
STRINGXP_008354804.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37433262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31220.12e-67bHLH family protein