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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MDP0000124019 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family |
bHLH |
Protein Properties |
Length: 539aa MW: 58335.9 Da PI: 7.1693 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MDP0000124019 | genome | GDR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 26.9 | 8.9e-09 | 341 | 388 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq
MDP0000124019 341 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 388
8*************************9....677*****************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 539 aa
Download sequence Send
to blast |
MEKDSLAKPT WNPSGFSMEM QSNELNCAPQ QLPNSFFNAN WDNSLDQTDP FESALSSIVS 60 SPIAAAGNGG EGGDMIRELI GRLGSISNSG EISPHSYISS NYNNSSTNTS CYSTPLNSSQ 120 RGSLPIENLA QFQADPGFVE RAARFSCFGG GGGGNFGGQF NLNEAELAYR SMARIDSGKL 180 SRVSSNQSLK VAAGSQLAVQ ETNKSSPLDG NSAPDKKFIS RFSRASTPEN GELGDSREGS 240 SVSQQIPGGD LSMKAEIVTN SRKRKSAARG KAKDSSSSHP VKDAKVVAEK EEPNAKKSKN 300 DEASGKEKET SKAKTKANSE TPEAPKDYIH VRARRGQATD SHSLAERVRR EKISERMKFL 360 QDLVPGCNKV TGKAVMLDEI INYVQSLQCQ VEFLSMKLST VNPRMELNME ALLSKDIIQS 420 RGSLQNALYQ LDSSVPSFPF GYQPQQLPPL HSSGISSATD TQFPANPLNS ALRQSHGMQL 480 PAFDRFGEAA SQAYSKKFIF QMPTLFEDDL QSVVQMGFGQ IQQESFHGSG ASAQMKVEL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KP689401 | 1e-176 | KP689401.1 Prunus pseudocerasus isolate Unigene19909 bHLH transcription factor mRNA, complete cds. |