PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000123107 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | bZIP | ||||||||
Protein Properties | Length: 229aa MW: 25293.8 Da PI: 6.5114 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.1 | 5.1e-10 | 193 | 227 | 5 | 39 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 kr +r NR +A+rsR RK+++i eLe+ v +L+ MDP0000123107 193 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQ 227 8999**************************99885 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50217 | 8.519 | 191 | 227 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.72E-8 | 193 | 227 | No hit | No description |
Pfam | PF00170 | 3.7E-8 | 193 | 227 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 9.8E-10 | 193 | 227 | No hit | No description |
CDD | cd14703 | 3.20E-18 | 194 | 227 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 196 | 211 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence Send to blast |
MAQLPPKAPS MTPNWPDSSH QKMPPSMGGC FAPNGNAIAA TTSQNPSWVD EFLDFSSARR 60 GSHRRSISDS ITFLEAPMQE ECRVYAAPPG SGPHSHSQAN NNHHEFDRFD DEQFMSMFTT 120 HEISAAAAAA VVGPTGSSSN PSTPSDHNSI NDDEKEAQGK QQQINKQLKN ESEEVESQCE 180 LQTTSNDRKI DPKRVKRILA NRQSAQRSRV RKLQYISELE RSVTSLQVG |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018503142.1 | 1e-150 | PREDICTED: basic leucine zipper 34-like | ||||
Swissprot | Q9M2K4 | 1e-64 | BZP61_ARATH; Basic leucine zipper 61 | ||||
TrEMBL | A0A498J6L4 | 1e-166 | A0A498J6L4_MALDO; Uncharacterized protein | ||||
STRING | XP_008348698.1 | 1e-170 | (Malus domestica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2011 | 34 | 88 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58120.1 | 5e-57 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | MDP0000123107 |
Publications ? help Back to Top | |||
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