 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MA_97319g0010 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
|
| Family |
ERF |
| Protein Properties |
Length: 242aa MW: 26297.7 Da PI: 8.9197 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MA_97319g0010 | genome | ConGenIE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 63 | 6.5e-20 | 73 | 121 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+Wv+eIr+p++ ++r++lg+f+t+e+Aa+a++ a+ +l+g
MA_97319g0010 73 YRGVRRRS-WGKWVSEIREPKK---KTRIWLGSFDTPEMAARAYDVAAFYLKG 121
9****887.**********854...6************************998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 242 aa
Download sequence Send
to blast |
MTLCCSILPA SLSVQKSLGK KACFLLTSSA DTEASSKSAS TGKGGMKRIR TQDEATPSPP 60
HEESSLKLQN PAYRGVRRRS WGKWVSEIRE PKKKTRIWLG SFDTPEMAAR AYDVAAFYLK 120
GKRHALLNFP ELIDHLPRPI SSSPCHIQAA AAEAAVTFHS ESAGNSGRSC DAKKPARKRP 180
KKPPVRYNER AASSSDSEIA SVELSGQGDT SNSSSVCTPT ECVGECVVVE EDLFESLNLF 240
TY
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1gcc_A | 8e-17 | 73 | 130 | 3 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
| 5wx9_A | 1e-16 | 69 | 130 | 11 | 72 | Ethylene-responsive transcription factor ERF096 |
| Search in ModeBase |
| Orthologous Group
? help Back to Top |
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Representative plant | OGRP6 | 16 | 1718 |
