 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MA_96063g0020 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
|
| Family |
ERF |
| Protein Properties |
Length: 268aa MW: 29833.4 Da PI: 7.147 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MA_96063g0020 | genome | ConGenIE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 54.6 | 2.7e-17 | 62 | 112 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr ++ +g+++AeIrd + + r++lg+f t eeAa a+++a+ +++g
MA_96063g0020 62 HYRGVRKRP-WGKYAAEIRDSTR---HgVRVWLGTFETGEEAAMAYDQAAFAIRG 112
8********.**********422...25************************998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MVLYGVLKDD FSHGRHLTPS SDSQMMTSTQ EIKGQSGTAE RKPVQRSKPT KKLKAKVSGE 60
KHYRGVRKRP WGKYAAEIRD STRHGVRVWL GTFETGEEAA MAYDQAAFAI RGSNAILNFP 120
VEVVRNSFKT GPVFPASSVN FSGGSFEISS GVTTFSTQLS DYNSRIQQLD EYHSRTPTSA 180
PETHVVVRLD SCTKRRRPAP FPAEELRANI FEDSQNADKS GEVLLIAEPK CYETQSVLEL 240
ETLSVDYLEK LLLSTQEEEA AAAPTFEF
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1gcc_A | 2e-28 | 61 | 123 | 1 | 63 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | FJ071188 | 3e-95 | FJ071188.1 Pinus taeda isolate 1667 anonymous locus 0_3648_01 genomic sequence. |
| GenBank | FJ071192 | 3e-95 | FJ071192.2 Pinus taeda isolate 1655 anonymous locus 0_3648_01 genomic sequence. |
| Orthologous Group
? help Back to Top |
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Representative plant | OGRP6 | 16 | 1718 |
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT2G31230.1 | 1e-35 | ethylene-responsive element binding factor 15 |
