 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MA_9438016g0010 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
|
| Family |
MYB_related |
| Protein Properties |
Length: 232aa MW: 26689.9 Da PI: 5.8246 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MA_9438016g0010 | genome | ConGenIE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 54.8 | 2.1e-17 | 18 | 61 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+++++E++l+++++k+lG++ W++Ia +++ gRt++++k++w++
MA_9438016g0010 18 RGNFSPDEEDLIIRLHKLLGNR-WSLIAGRIP-GRTDNEVKNYWNT 61
89********************.*********.***********97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 232 aa
Download sequence Send
to blast |
MTLIWFRWVN YLRPNLKRGN FSPDEEDLII RLHKLLGNRW SLIAGRIPGR TDNEVKNYWN 60
TRLNKKAHAT AYIGLNSTRP TEPNIKEPAV SANQEGEREN VIYYPVIEDL NKGSSSSSYP 120
YSGPIAGVSA DIDLWNPLQL NFNIHPPWAY SNFLHDDSNS AFLPKPIVYN QENAHPLSSM 180
FDTENICQDH QMYSVPYSSL PFPEVGVQSD ALTFIPHMDE FADIFNHFQK LY
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1a5j_A | 2e-14 | 7 | 67 | 48 | 108 | B-MYB |
| Orthologous Group
? help Back to Top |
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Representative plant | OGRP5 | 17 | 1784 |
