 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MA_9438016g0010 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
|
Family |
MYB_related |
Protein Properties |
Length: 232aa MW: 26689.9 Da PI: 5.8246 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MA_9438016g0010 | genome | ConGenIE | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 54.8 | 2.1e-17 | 18 | 61 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+++++E++l+++++k+lG++ W++Ia +++ gRt++++k++w++
MA_9438016g0010 18 RGNFSPDEEDLIIRLHKLLGNR-WSLIAGRIP-GRTDNEVKNYWNT 61
89********************.*********.***********97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 232 aa
Download sequence Send
to blast |
MTLIWFRWVN YLRPNLKRGN FSPDEEDLII RLHKLLGNRW SLIAGRIPGR TDNEVKNYWN 60 TRLNKKAHAT AYIGLNSTRP TEPNIKEPAV SANQEGEREN VIYYPVIEDL NKGSSSSSYP 120 YSGPIAGVSA DIDLWNPLQL NFNIHPPWAY SNFLHDDSNS AFLPKPIVYN QENAHPLSSM 180 FDTENICQDH QMYSVPYSSL PFPEVGVQSD ALTFIPHMDE FADIFNHFQK LY
|
3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1a5j_A | 2e-14 | 7 | 67 | 48 | 108 | B-MYB |
Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP5 | 17 | 1784 |