PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_8984558g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 198aa    MW: 22121.9 Da    PI: 5.3631
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_8984558g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.61.1e-162372255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     ++kG+r +k +g+Wv+eIr p++   + r++lg+++t+e+Aa+a++ a  +l+g
  MA_8984558g0010 23 QFKGIRMRK-WGKWVSEIRMPNS---KGRIWLGSYDTPEKAARAYDFAVYCLRG 72
                     69*****99.**********832...49********************999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.0E-282281IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-202381IPR016177DNA-binding domain
CDDcd000187.74E-272382No hitNo description
SMARTSM003801.6E-312386IPR001471AP2/ERF domain
PROSITE profilePS5103220.6922380IPR001471AP2/ERF domain
PRINTSPR003671.4E-82435IPR001471AP2/ERF domain
PfamPF008471.4E-92472IPR001471AP2/ERF domain
PRINTSPR003671.4E-84662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    Send to blast
MAKPSSNQIS HSRPKNRSLK SRQFKGIRMR KWGKWVSEIR MPNSKGRIWL GSYDTPEKAA  60
RAYDFAVYCL RGSKAKFNFH NSLSEIPYAS SLSPAQIQAA AAKFAIEEFR LPSEDNATSS  120
SSCSKAESTI EGQDISVEQG PAFWDSVLDD LDSCDFITLE DFPPIDVCIE DYGFPFQLGE  180
ECGPGFLNLV LRPPEILP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A5e-142279159ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A5e-142079262ATERF1
3gcc_A5e-142079262ATERF1
5wx9_A8e-1423791471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
SwissprotQ9C5913e-34ERF16_ARATH; Ethylene-responsive transcription factor ERF016
TrEMBLB8LPP64e-87B8LPP6_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74930.13e-30ERF family protein