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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MA_89683g0010 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family |
MYB |
Protein Properties |
Length: 418aa MW: 44919.9 Da PI: 7.3282 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MA_89683g0010 | genome | ConGenIE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 55.6 | 1.2e-17 | 19 | 64 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+W++eEd l ++v+++G+++W+ I+r ++ gR++k+c++rw +
MA_89683g0010 19 KGPWSPEEDATLHRLVEKYGPRNWSQISRGIP-GRSGKSCRLRWCNQ 64
79******************************.***********985 PP
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2 | Myb_DNA-binding | 54.5 | 2.7e-17 | 73 | 115 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
++++ Ed +++a++++G++ W+tIar ++ gRt++ +k++w++
MA_89683g0010 73 PFSPHEDATIIQAHARHGNK-WATIARLLP-GRTDNAIKNHWNST 115
89******************.*********.***********986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 418 aa
Download sequence Send
to blast |
MGVPKDEAAV TMAVAERIKG PWSPEEDATL HRLVEKYGPR NWSQISRGIP GRSGKSCRLR 60 WCNQLSPQVE HRPFSPHEDA TIIQAHARHG NKWATIARLL PGRTDNAIKN HWNSTLRRRY 120 HGEKDHSNGL VVNLESAAED KEAMISLTAT APAMVPALVF AAAADSSRKR SNSSCSANDN 180 PGDAEVESRR LKRLNFSESP TSSDNNNNNN EEDTNSGHCN SVAPGSSPVQ QLHRPVPRQS 240 AFNCYEAVKM HEEASASVSA SGSAGAFDPP TSLSLSLPGS GSSSENNSSG ECSPIEQSFE 300 TKSAKFQAYQ QQTGYSFADP FPVGGYLKTE EAMAMMSTAV KIAIGQALPL IFQLPSGNSH 360 GGCSGDSSNF GGSLLSIMRE MIAKEVQNYT NGSQCSNQGP GLNSVAPVFR EVGLMLKK
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 167 | 191 | RKRSNSSCSANDNPGDAEVESRRLK |
Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP5 | 17 | 1784 |