PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_896002g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 324aa    MW: 34381.1 Da    PI: 4.5739
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_896002g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-18117167155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  MA_896002g0010 117 PVYRGVRMRT-WGKWVSEIREPKK---KSRIWLGTFPTPEMAARAHDVAALSIKG 167
                     68*****998.**********854...6***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.2E-12117167IPR001471AP2/ERF domain
SuperFamilySSF541713.33E-21118176IPR016177DNA-binding domain
SMARTSM003801.6E-36118181IPR001471AP2/ERF domain
PROSITE profilePS5103223.275118175IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-31118176IPR001471AP2/ERF domain
CDDcd000183.01E-31119177No hitNo description
PRINTSPR003674.5E-10119130IPR001471AP2/ERF domain
PRINTSPR003674.5E-10141157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MVRSFESEAS PSSACCGLNE QQGRSCADSG PRGAINSCIC PDLSGGNCIY RSSALVNAAA  60
STSTGSSGSD SALVLMQNRS RKRRAEEINN ADDSGEEESA VCNVDKQGGR GKGNRHPVYR  120
GVRMRTWGKW VSEIREPKKK SRIWLGTFPT PEMAARAHDV AALSIKGKSA FLNFPNLVAS  180
LPRPATLSGK DIQAAAAAAA AEFQMPSEKD RGEDGSLDLA GMNTVISIDA DTEISAESRN  240
NEQAAAAAAC AASNSAWVSN FLSGNESTII DDDILFDLPN FLGNMAEALL VAPPWLLEQE  300
ELYGNTYSAA DNVYEGNGVM SLWN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-21107176373Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLB8LM171e-115B8LM17_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-45ERF family protein