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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_8343g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | BES1 | ||||||||
Protein Properties | Length: 323aa MW: 34976 Da PI: 9.0325 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 125.4 | 7.3e-39 | 23 | 108 | 7 | 92 |
DUF822 7 ptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspes 92 ++ E+E++k+RER+RR i++ki+ GLR++G+y+lp raD+n+Vl+AL++eAGw+ve+DGttyr++ p+++ ++ ++++ MA_8343g0010 23 SSASEKEKTKLRERHRRSITTKIFNGLRKYGGYNLPPRADINDVLRALANEAGWIVEPDGTTYRAQGMPQTSGNHSMPPLQQTTVM 108 5678************************************************************7777774444433333333333 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 8.3E-36 | 24 | 185 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence Send to blast |
MKESSSHDAH SREGEQKQLK PKSSASEKEK TKLRERHRRS ITTKIFNGLR KYGGYNLPPR 60 ADINDVLRAL ANEAGWIVEP DGTTYRAQGM PQTSGNHSMP PLQQTTVMKT SLTPTSSFGG 120 GASMGGFNCP IPGIITENID MTGGDCSTTA SPRHMGIQQP SNNSSLSLLP SSGLSSPFAS 180 PASSDGAQGQ LATSFFPGMT GGYLPTSGRE REVSLMKDDV SAYFSADTLE AREFMTSRDT 240 LEAREFMTSR DTLESREFLM GRNNIIPNSN ILNYANLSGV RYGMRSTLPS IMMLSNQHPF 300 LQEARASNQN TPIGSPQRHG GAG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 7e-11 | 40 | 91 | 391 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 7e-11 | 40 | 91 | 391 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 7e-11 | 40 | 91 | 391 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 7e-11 | 40 | 91 | 391 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT109344 | 0.0 | BT109344.1 Picea glauca clone GQ03207_G04 mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024391347.1 | 6e-80 | protein BZR1 homolog 4-like isoform X2 | ||||
STRING | PP1S70_273V6.1 | 4e-77 | (Physcomitrella patens) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP10087 | 8 | 11 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45880.1 | 1e-22 | beta-amylase 7 |