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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_8215969g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | Trihelix | ||||||||
Protein Properties | Length: 198aa MW: 22483.4 Da PI: 7.6105 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 38.1 | 3.9e-12 | 19 | 105 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W v L++ + + + + lk ++Wee+ k++ + + +s kqC++k ++l+kryk +k+ + ++ +++ t+++f++l+ MA_8215969g0010 19 WHPATVFRLLDTYGGKYADGKHH-LKIKDWEEILKAVnrqsEGSKTCKSVKQCRDKVDSLKKRYKLEKQKADRHGVDKV-TWSFFHKLD 105 77778888888888877777665.9999*********88655556678*************************966666.9******98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 4.4E-15 | 17 | 107 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence Send to blast |
MGSNIYDFDK ADGVCRCEWH PATVFRLLDT YGGKYADGKH HLKIKDWEEI LKAVNRQSEG 60 SKTCKSVKQC RDKVDSLKKR YKLEKQKADR HGVDKVTWSF FHKLDEIMGA FNRSAKDSEI 120 ADRIETEADK FEEYSVGNAL GIAESAIVDN EIVMAENSPA SASTTEEGKA LAHDRLHKIY 180 LLSFAALHWN SLKTIMPR |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT101318 | 0.0 | BT101318.1 Picea glauca clone GQ01301_J22 mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0D6R2W5 | 1e-36 | A0A0D6R2W5_ARACU; Uncharacterized protein | ||||
TrEMBL | A0A0D6R6K4 | 9e-36 | A0A0D6R6K4_ARACU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP11635 | 4 | 7 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10030.1 | 6e-18 | Trihelix family protein |