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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_82060g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | SAP | ||||||||
Protein Properties | Length: 462aa MW: 50691.5 Da PI: 5.7874 | ||||||||
Description | SAP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SAP | 125.3 | 6e-39 | 39 | 175 | 26 | 153 |
SAP 26 s..........gesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrsdllwqrltrriWrrtkllrdtW 111 + e++ +++ r+ + +vwpePf+eala+ va++a+r G la +a++nvfqvc twravs s++lw+ l + +W+++++ + W MA_82060g0010 39 EfsarrsrarsHETDVSQEARNDQNGGVWPEPFIEALAQAVALEAARCGGALAVGPAVVNVFQVCCTWRAVSHSEMLWKALMHSVWDQNDRQSESW 134 033344444335666667777778889********************************************************************* PP SAP 112 reeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsC 153 r+ yi hrta+nfr +r +y ++d ++ +++ + + C MA_82060g0010 135 RNRYIRLHRTASNFRYNRAKYAAIEYDVSSDSNS-NGNGTAC 175 ***************************9855554.4455555 PP | |||||||
2 | SAP | 233.8 | 7.3e-72 | 178 | 460 | 181 | 452 |
SAP 181 lhvstflpqhrdrlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaet 276 ++t+++ ++rlG +s+a++Giv+ + ++vfa++ G i+v i + r a+ G+v +dG+lvdf+G++rWwvGlyaG++G+a hiWda t MA_82060g0010 178 ECIRTMRAGDQNRLGSLSQAIAGIVLHQDKVVFASFYGSIFVGSISR---GDVRCAHPGNVRDDGTLVDFTGCDRWWVGLYAGISGHACHIWDAGT 270 5689*****************************************98...689******************************************* PP SAP 277 eelvfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGvatvrrve 372 eelvf GG +tdP+a++GW mlte +e +Grv++ ++ + t+l++ ++ eee+ G+iv s+d++ + ++++ + G+a+vr++ MA_82060g0010 271 EELVFNGGGITDPDALRGWRMLTEQAERIGRVKLGGNGLLLLATRLKMKKKQMMGWIPFTDEEETDDGIIVESVDVNRDRFLAASNDGNARVRKIR 366 ************************************************999998888888888888****************************** PP SAP 373 nleevcrfrvrg...............aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldf 452 le+vc f g r++lg +n+ a +++ gv+ +W+ ++ + ly l e+vg+v lv dd hvav++ d+ ihl+ f MA_82060g0010 367 ALENVCAFPFDGlggaddhssgsnnnnNYRKILGTLNTWLAFICIDGVVHAWDADSGA-RLYRLVEQVGDVFDLVGDDEHVAVCAVDNGIHLWSF 460 ********76432222211111222334699************************977.99********************************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF81383 | 6.32E-7 | 96 | 144 | IPR001810 | F-box domain |
Gene3D | G3DSA:1.20.1280.50 | 6.4E-7 | 97 | 152 | No hit | No description |
Gene3D | G3DSA:2.130.10.10 | 9.7E-10 | 176 | 277 | IPR015943 | WD40/YVTN repeat-like-containing domain |
SuperFamily | SSF50978 | 1.28E-10 | 197 | 277 | IPR017986 | WD40-repeat-containing domain |
SuperFamily | SSF50978 | 1.28E-10 | 335 | 461 | IPR017986 | WD40-repeat-containing domain |
Gene3D | G3DSA:2.130.10.10 | 9.7E-10 | 335 | 460 | IPR015943 | WD40/YVTN repeat-like-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009554 | Biological Process | megasporogenesis | ||||
GO:0009908 | Biological Process | flower development | ||||
GO:0030163 | Biological Process | protein catabolic process | ||||
GO:0046622 | Biological Process | positive regulation of organ growth | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 462 aa Download sequence Send to blast |
MSSQVPGSEK GQGASAQTLA QEEGEIPVER GGYSGERGEF SARRSRARSH ETDVSQEARN 60 DQNGGVWPEP FIEALAQAVA LEAARCGGAL AVGPAVVNVF QVCCTWRAVS HSEMLWKALM 120 HSVWDQNDRQ SESWRNRYIR LHRTASNFRY NRAKYAAIEY DVSSDSNSNG NGTACSKECI 180 RTMRAGDQNR LGSLSQAIAG IVLHQDKVVF ASFYGSIFVG SISRGDVRCA HPGNVRDDGT 240 LVDFTGCDRW WVGLYAGISG HACHIWDAGT EELVFNGGGI TDPDALRGWR MLTEQAERIG 300 RVKLGGNGLL LLATRLKMKK KQMMGWIPFT DEEETDDGII VESVDVNRDR FLAASNDGNA 360 RVRKIRALEN VCAFPFDGLG GADDHSSGSN NNNNYRKILG TLNTWLAFIC IDGVVHAWDA 420 DSGARLYRLV EQVGDVFDLV GDDEHVAVCA VDNGIHLWSF RP |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT124189 | 1e-167 | BT124189.1 Picea sitchensis clone WS04720_I09 unknown mRNA. |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP9756 | 9 | 12 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35770.1 | 4e-80 | SAP family protein |