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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MA_78381g0010 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family |
HD-ZIP |
Protein Properties |
Length: 247aa MW: 27225.1 Da PI: 8.3245 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MA_78381g0010 | genome | ConGenIE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 40 | 6.8e-13 | 130 | 160 | 26 | 56 |
-HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 26 saeereeLAkklgLterqVkvWFqNrRakek 56
++++ LAk+l+L rqV vWFqNrRa+ k
MA_78381g0010 130 MSKQKQALAKRLNLRPRQVEVWFQNRRARTK 160
57899************************98 PP
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2 | HD-ZIP_I/II | 92.7 | 4.1e-30 | 131 | 195 | 26 | 91 |
HD-ZIP_I/II 26 perKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
+++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l++en+rL+ke +eLr +l
MA_78381g0010 131 SKQKQALAKRLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCESLTDENRRLQKELQELR-AL 195
69************************************************************9.55 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 247 aa
Download sequence Send
to blast |
MGMDMEDCNT GLGLGMSIGL GIGLLREDLH SHRHHVNGPP VQLDLLPLAP GLPSRDLPWG 60 KTSPGTDGER SAGESKATVP RRIDVNKLPA SCYYNEDAGT INVSSPNSAL SSFHVDSGGA 120 INAESSCYAM SKQKQALAKR LNLRPRQVEV WFQNRRARTK LKQTEVDCEF LKRCCESLTD 180 ENRRLQKELQ ELRALKLASP LYMQMPAATL TMCPSCERVV PAENSRPPPF TLAKPQFYPY 240 THSSAAC
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 154 | 162 | RRARTKLKQ |