 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MA_77200g0010 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
|
| Family |
LBD |
| Protein Properties |
Length: 185aa MW: 20615.6 Da PI: 6.0675 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MA_77200g0010 | genome | ConGenIE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 135.8 | 1.6e-42 | 39 | 138 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96
+CaaCk+lrr+C+++Cvlapyfp+++++kfa +h++FGasn++k+l++lp e+r da+ss+vyeA ar+rdPvyG++g+i++lqq++++l+ e a
MA_77200g0010 39 PCAACKLLRRRCTESCVLAPYFPQNDAQKFADAHRVFGASNIIKMLEDLPLEKRADAVSSMVYEASARLRDPVYGCAGTIWQLQQHVSKLQLEKAI 134
7******************************************************************************************99999 PP
DUF260 97 lkee 100
l++e
MA_77200g0010 135 LQAE 138
8876 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 185 aa
Download sequence Send
to blast |
MPLCDLLIDA ICHDANGLLF GNCILQMSEF RGGRQTTSPC AACKLLRRRC TESCVLAPYF 60
PQNDAQKFAD AHRVFGASNI IKMLEDLPLE KRADAVSSMV YEASARLRDP VYGCAGTIWQ 120
LQQHVSKLQL EKAILQAELL HMHMQQANIS SYIRENLHIV EGGDQSISEP FSHTLHDSCD 180
ELPTA
|
| Orthologous Group
? help Back to Top |
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Representative plant | OGRP60 | 16 | 318 |
