PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_76955g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | bHLH | ||||||||
Protein Properties | Length: 389aa MW: 44669.6 Da PI: 7.5001 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.1 | 3.6e-09 | 206 | 250 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h ++Er+RR ++++ f+ L +llP++ K +K +iL + +Y+++L MA_76955g0010 206 HMIAERNRRVKLKQHFSLLHSLLPHN-----SKRDKHSILSNTFKYMSEL 250 7899*********************8.....6***************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 12.424 | 201 | 250 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.57E-13 | 201 | 274 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.87E-8 | 205 | 255 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 6.0E-12 | 205 | 268 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 8.7E-7 | 206 | 250 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.9E-7 | 207 | 256 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 389 aa Download sequence Send to blast |
MTDPGFDNPI PSLLEIQLNP NMEIVAASAL EGGFNGSPVL PGAYMMMSSG ASGMMIQPKG 60 QNSSTGNIVA DSTSIMDKAR FEIPRYSTTE TSWYSSSSED MEAFYQLEHC NISQGHSHPQ 120 SFNVANNIMS VPETSMLYGQ SAFGSYLRSG HSLYVKTGRQ NLMKRCFKFL RKIDEKRREA 180 QRFQIGKIHE QHEFNASLQN KAAFHHMIAE RNRRVKLKQH FSLLHSLLPH NSKRDKHSIL 240 SNTFKYMSEL KRRVEELQQR NRALEESLRL DISRKEECSS FDQRHEEHQA TLVYRSDEVI 300 LKQSKNMPNQ VDMQINVQID PLSSPTNLMI VLLERLRELQ LEVVTVQSNI QPFNLEAHFL 360 LTQIKGDQWE SSKWENVVEV VRSTFSVNE |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP11631 | 3 | 7 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43650.1 | 7e-10 | bHLH family protein |