PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_7537g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | Dof | ||||||||
Protein Properties | Length: 419aa MW: 45988.2 Da PI: 6.4984 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 123.4 | 7.4e-39 | 52 | 110 | 4 | 62 |
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 alkcprCds+ntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+++ MA_7537g0010 52 VALKCPRCDSSNTKFCYYNNYSLSQPRYFCKTCRRYWTNGGSLRNVPVGGGCRKNKRAK 110 5789****************************************************976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 5.0E-28 | 39 | 108 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 4.8E-33 | 53 | 108 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.478 | 54 | 108 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 56 | 92 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0048364 | Biological Process | root development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 419 aa Download sequence Send to blast |
MVLRSVPNCH DSDIWSQSDM QDSVFKPSEE MLRPCSRPGL MDRRQKPNAD QVALKCPRCD 60 SSNTKFCYYN NYSLSQPRYF CKTCRRYWTN GGSLRNVPVG GGCRKNKRAK RTGDQPVNFS 120 GQNMESTTST SATNNNNEFN RCSSNLDQTS LPTLPSVYFN LLNEGTDGLG VAYSGRSLHQ 180 QQALRVADQS LLRGNCNSSA GILEISATSS EPTSLLPPLP NLPNLTSLLK SANLITGLES 240 PRISCSRADQ GASMAVRGDL RSIFEAQVAA TTSTAAILQV SDGFNDTFGL AVPGDRLNSD 300 QIHDNDIQWQ MQQQVDQQKL VIPVDNHGTE QVMLPYVHEN NGADELGHHH DLKLRQLFMT 360 SIPSSLGKVY DENRPGACNW QLPALSEGLL DTPGNNIGYW NGGGLPDLSS YASYTNSLI |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP38 | 17 | 445 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60200.1 | 2e-35 | TARGET OF MONOPTEROS 6 |