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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | MA_74910g0010 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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| Family | Trihelix | ||||||||
| Protein Properties | Length: 314aa MW: 35953.7 Da PI: 6.5266 | ||||||||
| Description | Trihelix family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | trihelix | 42.1 | 2.2e-13 | 36 | 120 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86
W q + L++ ++e+ +l rg l+ ++W+ s + +e g r qCk+k+e ++k++++++ ++ +++s ++pyfd++
MA_74910g0010 36 WDTQSTIILLDKYEEIYVKLDRGHLRLKDWKLLSVMVnAELGTDRATYQCKNKIEYMRKQFRRERLKLNSTgSCTS--SWPYFDRMA 120
9*********************************999999*************************99988635555..5******96 PP
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| Protein Features ? help Back to Top | ||||||
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| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Pfam | PF13837 | 1.2E-13 | 34 | 122 | No hit | No description |
| Sequence ? help Back to Top |
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| Protein Sequence Length: 314 aa Download sequence Send to blast |
MGNPSADDAM QLSQEESEQL PVISKGPKDS KNKEHWDTQS TIILLDKYEE IYVKLDRGHL 60 RLKDWKLLSV MVNAELGTDR ATYQCKNKIE YMRKQFRRER LKLNSTGSCT SSWPYFDRMA 120 QILGSIPKTA NGTGANADEI CPATGPHGHN SPQPQVQVTD TTDENETVSI PRARVRSTPE 180 VSGKPPIKKK RFESLNLARE LKEGLGLFAS VIERIEKIKM EMTMALERER MDREERRIQL 240 MLRQEDRRTK MILQTQLQMA TLFSQLKAQT DDQNQNKTEQ NQENEIGPMP GCMDELPEHP 300 VQQNTDCEIG PNHS |
| Orthologous Group ? help Back to Top | |||
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| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Representative plant | OGRP487 | 16 | 84 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G10030.2 | 2e-17 | Trihelix family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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