PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MA_69872g0010

Organism

Picea abies

Taxonomic ID

3329

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

VOZ

Protein Properties

Length: 482aa MW: 53823.2 Da PI: 5.4945

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MA_69872g0010	genome	ConGenIE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	414.3	2.3e-127	207	418	1	212
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelf 96 ppp aflgpkcalwdc+rpaqgs+w+qdycs fh +alneg+pg+ pvlrp+gidlkdgllfaal ak++gk vgipecegaatakspwna+elf MA_69872g0010 207 PPPEAFLGPKCALWDCPRPAQGSHWCQDYCSDFHGIVALNEGPPGMGPVLRPGGIDLKDGLLFAALGAKTRGKAVGIPECEGAATAKSPWNAPELF 302 89******************************************************************************************** PP VOZ 97 dlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvde 192 dl +l+ge +rewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmk++gglkrsyymdpqpss+fewhlyeye+n++da+alyrlelk+vd+ MA_69872g0010 303 DLFVLQGEVVREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKDLGGLKRSYYMDPQPSSQFEWHLYEYEMNNCDACALYRLELKQVDS 398 ******************************************************************************************** PP VOZ 193 kksakgkvskdsladlqkkl 212 kk++k+kv+ ds+ dlq+k+ MA_69872g0010 399 KKNTKAKVTGDSVFDLQHKI 418 ***************997 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009408	Biological Process	response to heat
GO:0009414	Biological Process	response to water deprivation
GO:0009631	Biological Process	cold acclimation
GO:0009816	Biological Process	defense response to bacterium, incompatible interaction
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048578	Biological Process	positive regulation of long-day photoperiodism, flowering
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence Send to blast
MSKSSAHQLF KTKAKNRVDD LQGMFTDLQQ ARKESRVGDT VVLEEQVHQL LREWKAELHE 60 ASPNTSLLEA SLCSSDLSTD MWRLLQLHEE EDDATSVLAA PYSSKPHLNE NTVEAANPTS 120 FQEVIPTGEM RKDFYANHAS TQVQTIDGTS RSENIHAEPL LQTIDEGLEA AAQMNRDFNH 180 NLCLSFDPEV EEETIPKFQG PCPGISPPPE AFLGPKCALW DCPRPAQGSH WCQDYCSDFH 240 GIVALNEGPP GMGPVLRPGG IDLKDGLLFA ALGAKTRGKA VGIPECEGAA TAKSPWNAPE 300 LFDLFVLQGE VVREWLFFDK PRRAFESGNR KQRSLPDYSG RGWHESRKQV MKDLGGLKRS 360 YYMDPQPSSQ FEWHLYEYEM NNCDACALYR LELKQVDSKK NTKAKVTGDS VFDLQHKIRL 420 SGELSVDTKG NTKGRAKLTQ KNGSKYPYSA ANPVAPVSNN FLYGQAVQYG YYVEETNGYY 480 GT

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence Send to blast

MSKSSAHQLF KTKAKNRVDD LQGMFTDLQQ ARKESRVGDT VVLEEQVHQL LREWKAELHE  60
ASPNTSLLEA SLCSSDLSTD MWRLLQLHEE EDDATSVLAA PYSSKPHLNE NTVEAANPTS  120
FQEVIPTGEM RKDFYANHAS TQVQTIDGTS RSENIHAEPL LQTIDEGLEA AAQMNRDFNH  180
NLCLSFDPEV EEETIPKFQG PCPGISPPPE AFLGPKCALW DCPRPAQGSH WCQDYCSDFH  240
GIVALNEGPP GMGPVLRPGG IDLKDGLLFA ALGAKTRGKA VGIPECEGAA TAKSPWNAPE  300
LFDLFVLQGE VVREWLFFDK PRRAFESGNR KQRSLPDYSG RGWHESRKQV MKDLGGLKRS  360
YYMDPQPSSQ FEWHLYEYEM NNCDACALYR LELKQVDSKK NTKAKVTGDS VFDLQHKIRL  420
SGELSVDTKG NTKGRAKLTQ KNGSKYPYSA ANPVAPVSNN FLYGQAVQYG YYVEETNGYY  480
GT

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT115389	0.0	BT115389.1 Picea glauca clone GQ03615_G11 mRNA sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011626288.1	0.0	transcription factor VOZ1
Refseq	XP_011626289.1	0.0	transcription factor VOZ1
Swissprot	Q9SGQ0	1e-170	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	W1Q0P1	0.0	W1Q0P1_AMBTC; Uncharacterized protein
STRING	ERN14021	0.0	(Amborella trichopoda)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP2327	13	35

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-173	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]