PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_66681g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | bHLH | ||||||||
Protein Properties | Length: 553aa MW: 61665.4 Da PI: 4.7587 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.8 | 4.5e-09 | 383 | 425 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +ErrRR+r+N+++ Lr+++P+ +K++ +iL ++e+ k+L MA_66681g0010 383 LAERRRRKRLNERLCMLRSVVPTI-----TKMDRTSILSDTIEHTKQL 425 58*********************7.....6**************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 14.062 | 376 | 425 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 2.49E-14 | 379 | 446 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 5.4E-10 | 382 | 431 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 7.7E-13 | 383 | 437 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 8.6E-7 | 383 | 425 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 553 aa Download sequence Send to blast |
MDTSIYDQIF MSRTMAECTW GNSNYGHFDI SEYRVLEEGN GLLALMDSNF LAANSVLNVT 60 EATRSPNTEL VRSQYGNDIF GGCTHNLSDQ AYSCAWNAAY PRDLDENSFR FGHYTSSKCF 120 QTLNWEDRGD GSLGYGAEFQ QNTFGGATAF NSENSNDLNK VQPVDQGNNI CEILREQASQ 180 NELGFICSNV NDIRHVGSDS SKFSVGYFHE NSMKSTIGQP YNGISFNQYD EMEMNGVLLG 240 YNTESAISTL LNEDKTSIEP LEFDGTKGIV TVSVSELDGF DDKTPLSTSY ETEIYSDQQS 300 PQTVGLPLKV SENRVPINTA ASQLVKSDWN REENGGRMDE LFVMNDANGT KVTYTTGEGE 360 SSNAKVVRGG VSKSKGHPAK NLLAERRRRK RLNERLCMLR SVVPTITKMD RTSILSDTIE 420 HTKQLLQQIQ FLHGELQPQA NWPEHLRAYE GYFRSAGMDC DQKFADKHIS KFEVKRTGTR 480 DLNIHMTCQT NPSILLSTIS TLESFGLDIQ QAIISCFSDF GVQAHCSEID KAKSNIRPED 540 IKLALLQTAG YLG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 384 | 391 | ERRRRKRL |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP557 | 16 | 78 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65640.1 | 1e-25 | beta HLH protein 93 |