PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_66378g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 590aa    MW: 64706.6 Da    PI: 6.3715
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_66378g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.81.5e-11519564655
                    HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +++Er RR ri +++ +L+el+P+      k  + a++L +AveY+k Lq
  MA_66378g0010 519 SIAERVRRTRISDRIRKLQELVPNM----EKQTNTADMLDEAVEYVKLLQ 564
                    689*********************7....467***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.507513563IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-15516578IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.83E-10517568No hitNo description
Gene3DG3DSA:4.10.280.102.3E-15518576IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-8519564IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.6E-11519569IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042335Biological Processcuticle development
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 590 aa     Download sequence    Send to blast
MATEKQSEMT RADGTPSRRK RGQTSHDDFN DVQDELTRVK SGENSEESDE EFLVFLDLMV  60
DCHSRYGDCR AHLRIIRNFY QQSDIALXFP NSFRVSEHLQ TCAMMAPIGL PENFQASAGL  120
MRYNSAPGSF LVSLEDDGSS ILPHVSGAGP DNALSRILSN DSSLTTESNS GAIKHNDSSQ  180
SSKTEPENHL EEHNNYSRMV VHNSSHRKRS SGNVAEEDLG KHNHVASVLE NGMEASQNSF  240
CSSQMSKMCQ AQGPQSGEQL MNNTFKQNPV LYNAIDSSGE RPGSLPLSAT KSSLVRHSSS  300
PAGALSRMTS DGQRIPENGY LEGVMTNGKM GVSTLASENG SCGTAIAPNR VSQQMNFSRQ  360
SSSPAGLLTQ LSMDMEIPEI VDKLNMNMGR SSGESLARCS SDSARLGSVG QGQGYISSLS  420
TRSWEDGTML SGNYEGIQNS ANFSARKRGR DIDEKMILGL NLPEKLEGEA RRHSASALAN  480
HHFGLYESGS SEIALEKILE ESVPCRIRAK RGCATHPRSI AERVRRTRIS DRIRKLQELV  540
PNMEKQTNTA DMLDEAVEYV KLLQKKVQEL SEKQCKCDCA SREQADVNKA
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00181DAPTransfer from AT1G35460Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLQ9SQ791e-132Q9SQ79_PINTA; Helix-loop-helix protein 1A
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5111580
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.16e-37bHLH family protein