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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MA_57689g0010 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family |
HD-ZIP |
Protein Properties |
Length: 371aa MW: 41593.6 Da PI: 5.702 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MA_57689g0010 | genome | ConGenIE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 54.3 | 2.3e-17 | 233 | 287 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k
MA_57689g0010 233 RKKLRLSKEQSALLEESFKEHNTLNPKQKLALAKQLSLRPRQVEVWFQNRRARTK 287
778899***********************************************98 PP
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2 | HD-ZIP_I/II | 127 | 8.4e-41 | 233 | 322 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
+kk+rlskeq++lLEesF+e+++L+p++K +la++L l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l
MA_57689g0010 233 RKKLRLSKEQSALLEESFKEHNTLNPKQKLALAKQLSLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCESLTEENRRLQKEVQELR-AL 322
69*************************************************************************************9.55 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 371 aa
Download sequence Send
to blast |
MPDFESFDES FITPCLLSNL STIPGFRSWY VPGSSYPLDL ALKFHTTEKL QVVGFFLARF 60 EIIGPFCDFS SAPMAGFQYF VKTMPRSAED YGAGLRLGMG RVEEEKEEEE EGCWQQQKRN 120 EPLVQLDLLP LGSSHRESSS AALPSSWTGT CDGGRHVGGG GIDMNQIPSP ADFDDDAVVS 180 SPNSTVSSFQ MGPGSHATSG NKRERDDTNN SNSHELERAC SRASDEEDGE TTRKKLRLSK 240 EQSALLEESF KEHNTLNPKQ KLALAKQLSL RPRQVEVWFQ NRRARTKLKQ TEVDCEFLKR 300 CCESLTEENR RLQKEVQELR ALKVSHPFYM QLPAATLTMC PSCERVATAD THTTLSPWQA 360 LAPNTPRTLR S
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 152 | 160 | GGRHVGGGG |
2 | 231 | 237 | TRKKLRL |
3 | 281 | 289 | RRARTKLKQ |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |