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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MA_5374g0010 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family |
HSF |
Protein Properties |
Length: 336aa MW: 37595.3 Da PI: 7.7274 |
Description |
HSF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MA_5374g0010 | genome | ConGenIE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HSF_DNA-bind | 115.7 | 2.8e-36 | 26 | 116 | 2 | 101 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98
Fl k+y++++d++++++isw+e g++f+v+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF++++F+kg+k+ll++i+
MA_5374g0010 26 FLIKTYQLVDDSKTDDIISWNEAGTTFIVWRPAEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFSNEYFRKGEKQLLSEIH 113
9*****************************************************************99.........******************** PP
XXX CS
HSF_DNA-bind 99 rkk 101
r+k
MA_5374g0010 114 RRK 116
*97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 336 aa
Download sequence Send
to blast |
MAHSAKQNND GTPVTVESHR SVPAPFLIKT YQLVDDSKTD DIISWNEAGT TFIVWRPAEF 60 ARDLLPNYFK HNNFSSFVRQ LNTYGFRKIV PDRWEFSNEY FRKGEKQLLS EIHRRKGLIQ 120 PPPPPENRSI SPSNSGDEQT WSSTSSPNSP PAVEALSHKN AMEENEKLRK ENMLLVSELT 180 QMKKLHNQLL LFLSRHVNIT SADHVASFLS QSVGPSEGLS MLARLKDYLE QYGGEEISRD 240 FPGSSLSSGV SVVNDDPFVS SSAKEIMASK RPPFVDGACR EIGRKSYLSV KIEDDDEKGN 300 PKLFGVPLLP SKRSLPGSSD NGQPESMIRK IGRCAN
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Functional Description ? help
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Source |
Description |
UniProt | DNA-binding protein that specifically binds heat shock promoter elements (HSE) and activates transcription. |
Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP96 | 17 | 233 |