PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Orthologous Group |

Publication

Basic Information? help Back to Top

TF ID

MA_493516g0010

Organism

Picea abies

Taxonomic ID

3329

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

BES1

Protein Properties

Length: 139aa MW: 16052 Da PI: 6.5521

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MA_493516g0010	genome	ConGenIE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	128.1	1.1e-39	61	127	6	72
DUF822 6 kptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkg 72 ++++kE+E++k+RER+RRai+++i++GLR++Gny lp+raD+n+V++AL+reAGw+v++DGttyr + MA_493516g0010 61 REREKEKERTKLRERQRRAITSRILSGLRQYGNYTLPVRADINDVIAALAREAGWTVDPDGTTYRSQ 127 6899*************************************************************54 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	6.4E-38	61	127	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 139 aa Download sequence Send to blast
MDMADQAHTV MSASAIKRDE DDQELQNQQR EQEQEQEEQG QGIAEQVLLP AGNATVKRRI 60 REREKEKERT KLRERQRRAI TSRILSGLRQ YGNYTLPVRA DINDVIAALA REAGWTVDPD 120 GTTYRSQAHV LLLYFMLKI

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	EF081576	0.0	EF081576.1 Picea sitchensis clone WS0296_O23 unknown mRNA.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008232902.1	4e-30	PREDICTED: beta-amylase 7
Refseq	XP_010523740.1	4e-30	PREDICTED: beta-amylase 7
Swissprot	O80831	2e-29	BAM7_ARATH; Beta-amylase 7
TrEMBL	A0A4D9BKE8	3e-30	A0A4D9BKE8_SALSN; Uncharacterized protein
STRING	XP_008232902.1	2e-29	(Prunus mume)
STRING	XP_010523740.1	2e-29	(Tarenaya hassleriana)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP10087	8	11

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45300.2	2e-22	beta-amylase 2

Publications ? help Back to Top
Soyk S, et al. The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation. Plant Cell, 2014. 26(4): p. 1746-1763 [PMID:24748042]