PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MA_459791g0010

Organism

Picea abies

Taxonomic ID

3329

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

Dof

Protein Properties

Length: 301aa MW: 32667.4 Da PI: 9.312

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MA_459791g0010	genome	ConGenIE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.5	3.4e-39	33	93	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprCdstntkfCyynnyslsqPr+fCk+CrryWtkGG+lr vPvGgg+rknk+++ MA_459791g0010 33 PEQALKCPRCDSTNTKFCYYNNYSLSQPRHFCKTCRRYWTKGGTLRTVPVGGGCRKNKRAK 93 7899******************************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	3.0E-28	32	91	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.4E-33	35	91	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.357	37	91	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	39	75	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0048364	Biological Process	root development
GO:0005634	Cellular Component	nucleus
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence Send to blast
MLGMMQERGF RPSGEDLLSC SRPLLERRLK HQPEQALKCP RCDSTNTKFC YYNNYSLSQP 60 RHFCKTCRRY WTKGGTLRTV PVGGGCRKNK RAKRPVAAEQ PIKNKRAKRP VAAEQPMFST 120 QSEPSTSATP SASALPIALD HQTDLNPATN SSSYFNLPAN STTGPTEANL AFARIQQAAR 180 HGGRSVLPNC NNSDFLGLSC GSTTQSSFGP QNSLNSLNPI SSLTNLSALS ALNSLKFSFA 240 GLEDFPVNSN RSDQGSLAVP SEWQIPSEST LFEQAGDSTN YWSGGAWGDL TSYGSSVSPQ 300 I

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT110907	0.0	BT110907.1 Picea glauca clone GQ03229_K18 mRNA sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	T2B774	0.0	T2B774_PINPS; Dof6

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP38	17	445

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	5e-36	TARGET OF MONOPTEROS 6