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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MA_4076g0010 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family |
bHLH |
Protein Properties |
Length: 590aa MW: 65474.7 Da PI: 7.6583 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MA_4076g0010 | genome | ConGenIE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 41.9 | 1.8e-13 | 427 | 473 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
+h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI++Lq
MA_4076g0010 427 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAISYIQELQ 473
799***********************66......******************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 590 aa
Download sequence Send
to blast |
MGSEAAAASR FWNEEDKATV NSLLGPSAFE HLMMSYLSSE GLVSGINDCA LQQKLQNLVE 60 SSSFNWTYAI FWQLSRSKNG DVVLGWGDGS FKGPREGQEA DQARGFDQRF AETDQQLKKK 120 VLQKLQSFFG GGGEEDNNFV SGLDNVSDTE MFYLASMYYS FPRGIGVPGQ ALASGKNIWL 180 NEPSKLPTNM CSRACLAKTG GIQTLVCLPM EHGVVEVGSV EMIRESKHAI DKIRSSFNEN 240 ACDGNRGQPT VKGSLVAPFS PNPIRVNAVN AKVAPPLKPS HDWKIFGQEL SKSSESVVTK 300 VEERDRHYHP VFRPPYSHAA PYVTNEQRIS YTNANQNGLQ SPNWSHISNG EGGEIYNTRD 360 LIKQSSRISP ISVAGPSLSA VTARPPLMES EEHSDVEASE RRPVVVEERR PRKRGRKPAN 420 GREEPLNHVE AERQRREKLN QRFYALRAVV PNISKMDKAS LLGDAISYIQ ELQNKVKDME 480 TEKEKQQQPQ LQQAKSNIQD GRIVDPISDI DVQMMSGEAT VRVSCPKESH PVGRVMLALQ 540 RLQLDVHHAN ISAANENILH TFVIKLGGAQ ALTKDQLLEA ISGWSPRQKQ
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
4rqw_A | 1e-35 | 46 | 240 | 4 | 195 | Transcription factor MYC3 |
4rqw_B | 1e-35 | 46 | 240 | 4 | 195 | Transcription factor MYC3 |
4rs9_A | 1e-35 | 46 | 240 | 4 | 195 | Transcription factor MYC3 |
4yz6_A | 1e-35 | 46 | 240 | 4 | 195 | Transcription factor MYC3 |
Search in ModeBase |
Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 400 | 417 | RRPVVVEERRPRKRGRKP |
2 | 408 | 416 | RRPRKRGRK |