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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MA_37256g0010 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family |
MYB |
Protein Properties |
Length: 394aa MW: 44520.1 Da PI: 6.4331 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MA_37256g0010 | genome | ConGenIE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 56.7 | 5.4e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg W++eEde+l+++v+ +G g+W+ +++ g+ R++k+c++rw +yl
MA_37256g0010 14 RGLWSPEEDEKLIKYVTAYGHGCWSVVPKQAGLQRCGKSCRLRWINYL 61
788*******************************************97 PP
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2 | Myb_DNA-binding | 48.9 | 1.5e-15 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+++ +E+ l++d++k G++ W+ Ia++++ gRt++++k++w++
MA_37256g0010 67 RGSFSLQEERLIIDLHKIIGNR-WAQIAKHLP-GRTDNEVKNFWNS 110
899*******************.*********.***********96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 394 aa
Download sequence Send
to blast |
MGHHSCCNKQ KVKRGLWSPE EDEKLIKYVT AYGHGCWSVV PKQAGLQRCG KSCRLRWINY 60 LRPDLKRGSF SLQEERLIID LHKIIGNRWA QIAKHLPGRT DNEVKNFWNS CIKKKLMAQG 120 IDLKAHKLLN QAASSKELQE EKSASLINQG FAASETRDGL KRVADIRELV PGNYMGSFLC 180 AGNADISPYY AIHGGTWMER PTYGDYVRPD QEEILYESIS VNDFRHDISQ RLPVLNDYQI 240 SKSQNFENKL LQPETISDPT TFSSQMKGFD QLKHPFLGPN NPIELGQFGM DAISHYQSTN 300 NQLDTFVIPN AACLSHSSDS GFNPSCDTRR MYLPKLCEIE IAEAECTSDQ GEANGFRFSS 360 AYGSYENYGI EFSDSAITIA MDSECINPVT EWNS
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1a5j_A | 7e-32 | 14 | 116 | 7 | 108 | B-MYB |
Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP5 | 17 | 1784 |