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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
MA_37058g0010 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
|
| Family |
MYB |
| Protein Properties |
Length: 309aa MW: 34888.5 Da PI: 6.0078 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MA_37058g0010 | genome | ConGenIE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 41.9 | 2.3e-13 | 19 | 66 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT Ed++l +++k +G g+W+ +++ g++R +k+c++rw++yl
MA_37058g0010 19 RGAWTGSEDKILSEYIKTHGVGRWEDLPKKAGLKRGGKSCRLRWLNYL 66
89******************************99************97 PP
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| 2 | Myb_DNA-binding | 53.2 | 7e-17 | 72 | 115 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+ ++eE+ell +++++lG++ W++Ia +++ gRt++++k++w++
MA_37058g0010 72 RGNISPEEEELLFRLHRLLGNR-WSLIAGRLP-GRTDNEIKNYWNT 115
7899******************.*********.***********98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 309 aa
Download sequence Send
to blast |
MGRSPSCSSC SKHEEGLHRG AWTGSEDKIL SEYIKTHGVG RWEDLPKKAG LKRGGKSCRL 60
RWLNYLRPDI KRGNISPEEE ELLFRLHRLL GNRWSLIAGR LPGRTDNEIK NYWNTQLSKR 120
VQLGEFEPRF QKPFKRRGIS SPSNDDEGGV VDKDNYASQT LPLKTRAVRY CGRALVDGGS 180
YDYDHVPDTH DGINQEEDLK AADDHVVEID TSKSWCQLLL EDCMGDYQND RLEAINGLQP 240
NPSNGTANPS NGTDDRHQSP SPSSNQSIIL QENHSSCNLI DQEFPHSKDF NSSYFDSFLD 300
LGELSNLVP
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator, when associated with BHLH2/EGL3/MYC146, BHLH12/MYC1, or BHLH42/TT8. Involved in the control of flavonoid late metabolism in developing siliques. Plays a key role in determining the tissue-specific activation of leucoanthocyanidin reductase (BANYULS). {ECO:0000269|PubMed:15361138}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KU131218 | 0.0 | KU131218.1 Picea abies transcription factor MYB29 mRNA, complete cds. |
| Orthologous Group
? help Back to Top |
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Representative plant | OGRP5 | 17 | 1784 |
| Publications
? help Back to Top |
- Coego A, et al.
The TRANSPLANTA collection of Arabidopsis lines: a resource for functional analysis of transcription factors based on their conditional overexpression.
Plant J., 2014. 77(6): p. 944-53
[PMID:24456507] - Liu C,Jun JH,Dixon RA
MYB5 and MYB14 Play Pivotal Roles in Seed Coat Polymer Biosynthesis in Medicago truncatula.
Plant Physiol., 2014. 165(4): p. 1424-1439
[PMID:24948832] - Zhu Z, et al.
Characterization of the cis elements in the proximal promoter regions of the anthocyanin pathway genes reveals a common regulatory logic that governs pathway regulation.
J. Exp. Bot., 2015. 66(13): p. 3775-89
[PMID:25911741] - Liu Y,Shi Z,Maximova SN,Payne MJ,Guiltinan MJ
Tc-MYBPA an Arabidopsis TT2-like transcription factor and functions in the regulation of proanthocyanidin synthesis in Theobroma cacao.
BMC Plant Biol., 2015. 15: p. 160
[PMID:26109181] - Bulgakov VP,Veremeichik GN,Grigorchuk VP,Rybin VG,Shkryl YN
The rolB gene activates secondary metabolism in Arabidopsis calli via selective activation of genes encoding MYB and bHLH transcription factors.
Plant Physiol. Biochem., 2016. 102: p. 70-9
[PMID:26913794] - Li Y, et al.
Two IIIf Clade-bHLHs from Freesia hybrida Play Divergent Roles in Flavonoid Biosynthesis and Trichome Formation when Ectopically Expressed in Arabidopsis.
Sci Rep, 2016. 6: p. 30514
[PMID:27465838] - Li C,Zhang B,Chen B,Ji L,Yu H
Site-specific phosphorylation of TRANSPARENT TESTA GLABRA1 mediates carbon partitioning in Arabidopsis seeds.
Nat Commun, 2018. 9(1): p. 571
[PMID:29422671]
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