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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_367459g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | bZIP | ||||||||
Protein Properties | Length: 213aa MW: 23069.7 Da PI: 9.7782 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.6 | 4.1e-11 | 143 | 178 | 5 | 40 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 ++++r+ +NRe+ArrsR RK++ ++eL+ + ++++ MA_367459g0010 143 RKQKRMLSNRESARRSRMRKQQHMDELRAQASVKSS 178 79**************************99988775 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.2E-7 | 139 | 197 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.818 | 141 | 173 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 3.3E-8 | 143 | 175 | No hit | No description |
Pfam | PF00170 | 4.4E-7 | 143 | 172 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.04E-9 | 143 | 186 | No hit | No description |
CDD | cd14702 | 1.94E-15 | 144 | 174 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 146 | 161 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence Send to blast |
MLPVLSGSSQ TPLISSSAPL EGFSVRNINM NGVGPTLKTS QQLSSSACFH PPIATAGLTN 60 LQTWENNTRL KLNPSPPSNP AAEISSNSMP PPPPSTKLNL PPCTTNSTGS SSSMTYGSCP 120 PSSSHSGSEE EQQEQKKNVI DERKQKRMLS NRESARRSRM RKQQHMDELR AQASVKSSVA 180 SDIVQRENLN FTRKMIGWDQ EGISASPESS SGW |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 155 | 162 | RRSRMRKQ |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT109119 | 0.0 | BT109119.1 Picea glauca clone GQ03204_O11 mRNA sequence. |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP551 | 16 | 78 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18160.1 | 4e-13 | basic leucine-zipper 2 |