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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MA_21460g0010 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family |
HD-ZIP |
Protein Properties |
Length: 200aa MW: 22761.1 Da PI: 10.4549 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MA_21460g0010 | genome | ConGenIE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 57.1 | 3.1e-18 | 85 | 139 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+k+ +++k+q L+e F k+++p ++++ LA++l+L ++qVkvWFqNrRa+ k
MA_21460g0010 85 KKKVRLSKDQWALLQESFSKDSTPELNQKKALARQLNLRTKQVKVWFQNRRARTK 139
78999************************************************98 PP
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2 | HD-ZIP_I/II | 99.4 | 3.4e-32 | 85 | 173 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
+kk rlsk+q +lL esF+++++ e ++K++lar+L+l+++qv+vWFqnrRARtk+kq+E+dye Lkr+ ++l++en++L+ke +eLr +
MA_21460g0010 85 KKKVRLSKDQWALLQESFSKDSTPELNQKKALARQLNLRTKQVKVWFQNRRARTKLKQTEMDYELLKRCNESLTDENRKLQKELQELR-S 173
599************************************************************************************9.4 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 200 aa
Download sequence Send
to blast |
MDAIRPVPVS RRFDVNKFPP SCYSNKEASA INVSSSNSTV DSNAINSKSG YAMDSKRKLV 60 ATQELDHERA CSRVLSDVKE KGRAKKKVRL SKDQWALLQE SFSKDSTPEL NQKKALARQL 120 NLRTKQVKVW FQNRRARTKL KQTEMDYELL KRCNESLTDE NRKLQKELQE LRSLKLASPL 180 LPATTLTVCP CCETVASARQ
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 133 | 141 | RRARTKLKQ |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |