 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MA_201698g0010 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
|
| Family |
ERF |
| Protein Properties |
Length: 273aa MW: 30049.6 Da PI: 5.4927 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MA_201698g0010 | genome | ConGenIE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 61.2 | 2.3e-19 | 58 | 107 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+Wv+eIr+p++ ++r++lg+f t+e+Aa+a++ a+ +l+g
MA_201698g0010 58 EYRGVRRRS-WGKWVSEIREPKK---KTRIWLGSFNTPEMAARAYDVAAIYLKG 107
69****887.**********854...6***********************9988 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 273 aa
Download sequence Send
to blast |
MDNEACSLPE CMLNSSTDTE ASSKSASTAK GGIKTIRTRD EAAPSPPQES RFKMQYPEYR 60
GVRRRSWGKW VSEIREPKKK TRIWLGSFNT PEMAARAYDV AAIYLKGKTH AFLNFPELVD 120
HLPRPISSSP RHIQAAAAEA AVAFDSAAER AGNSGRSSDV TKRERRRPRN PPVSDKHAAT 180
PSSDQVSAVI SSDLKLETAS VELPGQRNAS NPSSVCPTAE ELGESVIEND LFESSNLYTN 240
LAEALLLPPP LFSIPEVEVE EQKLEEGFLW SDF
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | FJ117101 | 2e-59 | FJ117101.1 Pinus taeda isolate 4346 anonymous locus UMN_6348_01 genomic sequence. |
| GenBank | FJ117103 | 2e-59 | FJ117103.2 Pinus taeda isolate 4361 anonymous locus UMN_6348_01 genomic sequence. |
| GenBank | FJ117104 | 2e-59 | FJ117104.2 Pinus taeda isolate 4349 anonymous locus UMN_6348_01 genomic sequence. |
| GenBank | FJ117105 | 2e-59 | FJ117105.2 Pinus taeda isolate 4355 anonymous locus UMN_6348_01 genomic sequence. |
| GenBank | FJ117106 | 2e-59 | FJ117106.2 Pinus taeda isolate 4347 anonymous locus UMN_6348_01 genomic sequence. |
| GenBank | FJ117107 | 2e-59 | FJ117107.2 Pinus taeda isolate 4348 anonymous locus UMN_6348_01 genomic sequence. |
| GenBank | FJ117108 | 2e-59 | FJ117108.2 Pinus taeda isolate 4359 anonymous locus UMN_6348_01 genomic sequence. |
| GenBank | FJ117112 | 2e-59 | FJ117112.1 Pinus taeda isolate 4345 anonymous locus UMN_6348_01 genomic sequence. |
| GenBank | FJ117113 | 2e-59 | FJ117113.1 Pinus taeda isolate 4356 anonymous locus UMN_6348_01 genomic sequence. |
| Orthologous Group
? help Back to Top |
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Representative plant | OGRP6 | 16 | 1718 |
