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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
MA_19934g0010 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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| Family |
LBD |
| Protein Properties |
Length: 285aa MW: 31876.2 Da PI: 8.3062 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MA_19934g0010 | genome | ConGenIE | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 91.2 | 1.3e-28 | 9 | 106 | 1 | 93 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91
+C++C+vlr++C+++C+l+p++ +++q++++ +++k++G++ +++l+++ pe+ r+++++sl+yeA+ r+ +P++G+vg+++++++ ++q+
MA_19934g0010 9 SCNGCRVLRKGCSESCILRPCLhwistAESQANATIFLAKFYGRAGLTNLISNGPEHLRPAIFRSLLYEACGRMLNPIHGSVGLLWSGNWAVCQKG 104
6*********************9999778899*************************************************************987 PP
DUF260 92 ae 93
+e
MA_19934g0010 105 VE 106
76 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 285 aa
Download sequence Send
to blast |
SDHHTMRMSC NGCRVLRKGC SESCILRPCL HWISTAESQA NATIFLAKFY GRAGLTNLIS 60
NGPEHLRPAI FRSLLYEACG RMLNPIHGSV GLLWSGNWAV CQKGVENILR GSFPAVARDS 120
SASHVVPMEA MAFRELHRPV KTRGKVKGLS YSKSRRKVRE RAPVSSHMDS SCKSHDDWGD 180
ITNTLQKAAE NGKFNEKHIE KKSTFLSGQE VDEFIAADQA QMKYCHDLGN LKTSQTEVES 240
PCNSVGLELT LGSQEYFPRT PDKSLAFDLR CSEAFWDQCM ENYLP
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