 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MA_19453g0040 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 327aa MW: 37307.3 Da PI: 4.497 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MA_19453g0040 | genome | ConGenIE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 61.5 | 1.3e-19 | 81 | 134 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++t++q++ Le+ Fe ++++ e++ +LAk lgL+ rqV vWFqNrRa++k
MA_19453g0040 81 KKRRLTADQVQFLERSFEIENKLEPERKIQLAKDLGLQPRQVAVWFQNRRARWK 134
56789************************************************9 PP
|
| 2 | HD-ZIP_I/II | 131.7 | 2.9e-42 | 80 | 171 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
ekkrrl+++qv++LE+sFe e+kLeperK +la++LglqprqvavWFqnrRAR+ktkqlE+dy+ Lk++y++l+ + ++L ke+++Lr+e++
MA_19453g0040 80 EKKRRLTADQVQFLERSFEIENKLEPERKIQLAKDLGLQPRQVAVWFQNRRARWKTKQLERDYDILKSRYENLRVDYDSLLKEKDKLRAEVT 171
69**************************************************************************************9986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0001558 | Biological Process | regulation of cell growth |
| GO:0009637 | Biological Process | response to blue light |
| GO:0009651 | Biological Process | response to salt stress |
| GO:0009965 | Biological Process | leaf morphogenesis |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0042803 | Molecular Function | protein homodimerization activity |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 327 aa
Download sequence Send
to blast |
MMSGGRMYGG PNVLVMGNEN ISRSADALEA LLSSPVFNGS RSVANLEEVI GNVSKRPFYN 60
SFDQEETGDE DLDDCIHPPE KKRRLTADQV QFLERSFEIE NKLEPERKIQ LAKDLGLQPR 120
QVAVWFQNRR ARWKTKQLER DYDILKSRYE NLRVDYDSLL KEKDKLRAEV TFLTGKLHSK 180
DCDLEAQTKD SEYVDKKVFP QPASQCVEKF ERGTSIKDTP PSCKHEDLLS SGTDSSGVLD 240
EDSPHHVDCG HSSLDHVNSH LFEADQSDLS HADEEEEEEG MSEKLLPQTY TYHLLKVEDG 300
PYPDASIASY NEMFAMEDQV PLGPWWD
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 128 | 136 | RRARWKTKQ |
