 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MA_17672g0010 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
|
Family |
MYB |
Protein Properties |
Length: 427aa MW: 47520.1 Da PI: 6.5017 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MA_17672g0010 | genome | ConGenIE | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 51 | 3.3e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
+g+W++eEd +l+ ++q+G+g +W + +++ g++R++k+c++rw++yl
MA_17672g0010 14 KGPWSPEEDAKLKAFIEQHGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62
79*********************************************97 PP
|
2 | Myb_DNA-binding | 33.5 | 1e-10 | 70 | 111 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
++++Ed ++ + + G++ W+ Ia+ ++ gRt++++k++w++
MA_17672g0010 70 GFSEDEDSIICGLYASIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111
69******************.*********.***********97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 427 aa
Download sequence Send
to blast |
MGRAPCCDKA NVKKGPWSPE EDAKLKAFIE QHGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPDIRHGG FSEDEDSIIC GLYASIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 RKEQQTRRFK EAKSMSNGAG PYVSEGMSAA SSTINAIRSL MSNTEALYLS DRMPHMDMDP 180 SLGLLNPQFL QHTVSNIANY CSSSEHVSFG TGPPQGLDQE LTFDNASLRK LLFRTECAFT 240 ADNNNNTSQA SPPIISSQIY SPSTILDPGL VQDSFEKSCM NINVKEEPVA GALDHHHIDY 300 LASMTLRDSC SSTEGNYIQS PWLYQNGLQD HSCLSYEFPM EQMNEGIYWN SASSSLQGHH 360 EKEELCAYSS YKESTRHADE PTTTFWGAQL PCNYPKPMSD CPNYFSVAPS DANQQGSSRS 420 QEAGIIY
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1a5j_A | 4e-24 | 14 | 117 | 7 | 108 | B-MYB |
Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP5 | 17 | 1784 |