PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_174370g0020
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family Trihelix
Protein Properties Length: 229aa    MW: 27087.2 Da    PI: 9.0392
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_174370g0020genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix56.95.4e-1830114280
        trihelix   2 WtkqevlaLiearremeerlrrg......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcp 80 
                     Wt +e+l L+ea+++++er  rg      k ++ +W++v +++ ++ + rs++qC++kw+nl ++ykk++e e++  +++ s + 
  MA_174370g0020  30 WTLEETLILLEAKKQDDERRMRGgdkergKTAELRWKWVENYCFKHECIRSQNQCNDKWDNLLRDYKKVREYENRIIPGQPSYWH 114
                     **************999999874333333799******************************************98887776664 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.5032292IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.603.3E-52394IPR009057Homeodomain-like
PfamPF138379.1E-1230104No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MTDPSSSALV RVESTDTGGE RGREYRKGIW TLEETLILLE AKKQDDERRM RGGDKERGKT  60
AELRWKWVEN YCFKHECIRS QNQCNDKWDN LLRDYKKVRE YENRIIPGQP SYWHLEKHER  120
KERGLPSNLL YQVYEALHEV VDKRYAPRIT HPHSSGEKPS TSLQQHEQQQ QHTSQPNLPQ  180
QQQQQQQQPP PTHQQIPTQQ QQQPASGTFN PLPVQYQMLL FSLRFSSRG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002960379.11e-66trihelix transcription factor ASR3
RefseqXP_002967337.11e-66trihelix transcription factor ASR3
TrEMBLD8QR483e-65D8QR48_SELML; Uncharacterized protein
STRINGEFJ319366e-66(Selaginella moellendorffii)
STRINGEFJ379186e-66(Selaginella moellendorffii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP18811637
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.12e-41Trihelix family protein