 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MA_170369g0010 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
|
| Family |
LBD |
| Protein Properties |
Length: 193aa MW: 21318.2 Da PI: 6.5042 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MA_170369g0010 | genome | ConGenIE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 122.6 | 2.1e-38 | 28 | 127 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95
+CaaCk+lrr+C ++ vlapyfp+++ +kfa +h++FGasn++kll++l e r da+s +vyeA+ar+rdPvyG++g+++++q+ql+ql+++la
MA_170369g0010 28 PCAACKILRRRCREKFVLAPYFPSNDLHKFATAHRIFGASNIIKLLQELLAEGRADAVSNMVYEANARLRDPVYGCAGIVFQMQSQLSQLQSQLA 122
7********************************************************************************************** PP
DUF260 96 llkee 100
++++e
MA_170369g0010 123 TAQAE 127
*9987 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 193 aa
Download sequence Send
to blast |
MAPSHQTFSE LPQMASNVGG FRAHAPSPCA ACKILRRRCR EKFVLAPYFP SNDLHKFATA 60
HRIFGASNII KLLQELLAEG RADAVSNMVY EANARLRDPV YGCAGIVFQM QSQLSQLQSQ 120
LATAQAEILT MRLQQANFLA LITGSADSGK TTRPLSPSSN AISQESNDQQ TDLIYFEGED 180
PLQLWDDSVW TQL
|
| Orthologous Group
? help Back to Top |
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Representative plant | OGRP60 | 16 | 318 |
