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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_155502g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | bZIP | ||||||||
Protein Properties | Length: 192aa MW: 22050.7 Da PI: 7.0056 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 43.2 | 8.7e-14 | 109 | 167 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +rerr+ +NRe+ArrsR RK++ ++eL+ v+ + aeN++ + + l++ + ++ e+ MA_155502g0010 109 RRERRMLSNRESARRSRMRKQKHLDELRAQVAHMRAENRQILSSFDILTQRYRQVLEEN 167 89************************************************999998887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.8E-15 | 105 | 169 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.2E-8 | 106 | 157 | No hit | No description |
PROSITE profile | PS50217 | 11.082 | 107 | 170 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.68E-12 | 109 | 161 | No hit | No description |
Pfam | PF00170 | 7.4E-11 | 109 | 167 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 3.44E-18 | 110 | 161 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 112 | 127 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence Send to blast |
MQSEQVLLPL SPVISNGCFH MNVDDTRGAQ EFLSRDCYES LLSNSYFMLY PPPTLSNNNS 60 NSSSSPEACK PLPKGCYIRQ DSAASSCQTA CNSASDELEE QQHIINDERR ERRMLSNRES 120 ARRSRMRKQK HLDELRAQVA HMRAENRQIL SSFDILTQRY RQVLEENSLL KTETLELSQR 180 LHQLQQAITA SQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 121 | 128 | RRSRMRKQ |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | FJ101298 | 2e-98 | FJ101298.1 Pinus taeda isolate 5432 anonymous locus 2_6996_01 genomic sequence. | |||
GenBank | FJ101299 | 2e-98 | FJ101299.2 Pinus taeda isolate 5441 anonymous locus 2_6996_01 genomic sequence. | |||
GenBank | FJ101300 | 2e-98 | FJ101300.1 Pinus taeda isolate 5443 anonymous locus 2_6996_01 genomic sequence. | |||
GenBank | FJ101301 | 2e-98 | FJ101301.2 Pinus taeda isolate 5431 anonymous locus 2_6996_01 genomic sequence. | |||
GenBank | FJ101302 | 2e-98 | FJ101302.2 Pinus taeda isolate 5444 anonymous locus 2_6996_01 genomic sequence. | |||
GenBank | FJ101303 | 2e-98 | FJ101303.1 Pinus taeda isolate 5438 anonymous locus 2_6996_01 genomic sequence. | |||
GenBank | FJ101304 | 2e-98 | FJ101304.1 Pinus taeda isolate 5439 anonymous locus 2_6996_01 genomic sequence. | |||
GenBank | FJ101308 | 2e-98 | FJ101308.1 Pinus taeda isolate 5446 anonymous locus 2_6996_01 genomic sequence. | |||
GenBank | FJ101309 | 2e-98 | FJ101309.2 Pinus taeda isolate 5447 anonymous locus 2_6996_01 genomic sequence. | |||
GenBank | FJ101310 | 2e-98 | FJ101310.2 Pinus taeda isolate 5442 anonymous locus 2_6996_01 genomic sequence. | |||
GenBank | FJ101311 | 2e-98 | FJ101311.2 Pinus taeda isolate 5434 anonymous locus 2_6996_01 genomic sequence. | |||
GenBank | JQ262813 | 2e-98 | JQ262813.1 Pinus radiata isolate 5448 hypothetical protein (2_6996_01) gene, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | H9MB62 | 6e-69 | H9MB62_PINRA; Uncharacterized protein (Fragment) | ||||
TrEMBL | H9WH21 | 6e-69 | H9WH21_PINTA; Uncharacterized protein (Fragment) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP551 | 16 | 78 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 6e-29 | basic leucine-zipper 42 |