PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_155093g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | bHLH | ||||||||
Protein Properties | Length: 456aa MW: 51722 Da PI: 6.0262 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 45.3 | 1.5e-14 | 253 | 299 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + Er+RR+ +N+++++Lr+l+P++ +K + a+i+ A++YIk+L MA_155093g0010 253 ANHFATERQRREYLNEKYQNLRTLVPNP-----TKADRASIVGDAIDYIKEL 299 68**************************.....9****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.707 | 250 | 299 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 7.2E-12 | 253 | 299 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.11E-15 | 253 | 317 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.2E-14 | 253 | 311 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 9.12E-11 | 254 | 304 | No hit | No description |
SMART | SM00353 | 8.5E-12 | 256 | 305 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009555 | Biological Process | pollen development | ||||
GO:0048658 | Biological Process | anther wall tapetum development | ||||
GO:0052543 | Biological Process | callose deposition in cell wall | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 456 aa Download sequence Send to blast |
MYDDYFDPQP GCNMLPADLS SSSAIMGLEE NLQRPLLRLP IFSPGENNFS DEAGMLGSDL 60 QQQLNFELEQ EYHSQIIQDV LQQQTNLHQE MCSAQQLPNN GSATASSWEA SFHEMQEITL 120 FQQQQQQNAL HIQDQGHHMS SFASSNASTS AYPAPELLEL LQLPRCSVPS SAISFSSNHP 180 QLSFNPPQPP LLRDMLHTLN SHNYQLNPSK PYFGMDEKEA ALQAEAEAGR QFTNSILDLK 240 RDMSLSKGEV RGANHFATER QRREYLNEKY QNLRTLVPNP TKADRASIVG DAIDYIKELL 300 RTVEEMKILV EQKRSSCIGR SKRHKISHDH VESSSQHESV LQCGQDQKFL TNGSLRSSWL 360 QRTSKDGTQV DVRIVDNEVN IKLIQRKRRS CLLSVSLVLH ELHLEILHAN GANIGEHYIF 420 MFNTKIYEGS CEYARSIATK LMDAVDKQLT YSILNF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 384 | 389 | QRKRRS |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006854151.1 | 1e-114 | transcription factor bHLH91 | ||||
Refseq | XP_020528932.1 | 1e-114 | transcription factor bHLH91 | ||||
TrEMBL | U5D5K5 | 1e-113 | U5D5K5_AMBTC; Uncharacterized protein | ||||
STRING | ERN15618 | 1e-113 | (Amborella trichopoda) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP2659 | 14 | 31 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31210.1 | 2e-52 | bHLH family protein |