![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | MA_142711g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 248aa MW: 28248 Da PI: 6.6964 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 43 | 9.9e-14 | 165 | 223 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +rerr+ +NRe+ArrsR RK++ ++eL+ v+ + aeN++ + + l++ + ++ e+ MA_142711g0010 165 RRERRMLSNRESARRSRMRKQKHLDELRAQVAHMRAENRQILSSFDILTQRYRQVLEEN 223 89************************************************999998887 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.8E-15 | 161 | 225 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.4E-8 | 162 | 215 | No hit | No description |
PROSITE profile | PS50217 | 11.082 | 163 | 226 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.0E-10 | 165 | 223 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.13E-11 | 165 | 217 | No hit | No description |
CDD | cd14702 | 1.39E-21 | 166 | 217 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 168 | 183 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 248 aa Download sequence Send to blast |
RYCPGLLYYH CIVPLPIPSV LPSDCGGYLN LISVFAFHAV SILFPAEFCA FHSLLEMQSE 60 QVLLPLSPVI SNGCFHMNVD DTRGAQEFLS RDCYESLLSN SYFMLYPPPT LSNNNSNSSS 120 SPEACKPLPK GCYIRQDSAA SSCQTACNSA SDELEEQQHI INDERRERRM LSNRESARRS 180 RMRKQKHLDE LRAQVAHMRA ENRQILSSFD ILTQRYRQVL EENSLLKTET LELSQRLHQL 240 QQAITASQ |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 177 | 184 | RRSRMRKQ |
Binding Motif ? help Back to Top | |||
---|---|---|---|
Motif ID | Method | Source | Motif file |
MP00389 | DAP | Transfer from AT3G30530 | Download |
![]() |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
TrEMBL | H9MB62 | 2e-67 | H9MB62_PINRA; Uncharacterized protein (Fragment) | ||||
TrEMBL | H9WH21 | 2e-67 | H9WH21_PINTA; Uncharacterized protein (Fragment) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP551 | 16 | 78 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G30530.1 | 6e-29 | basic leucine-zipper 42 |