PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MA_138039g0010

Organism

Picea abies

Taxonomic ID

3329

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

G2-like

Protein Properties

Length: 361aa MW: 40107.5 Da PI: 10.3398

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MA_138039g0010	genome	ConGenIE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.1	7.2e-32	290	343	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH++Fv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ MA_138039g0010 290 PRMRWTSTLHAHFVHAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 343 9****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	1.97E-15	287	343	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	3.4E-28	288	343	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.5E-23	290	343	IPR006447	Myb domain, plants
Pfam	PF00249	6.5E-7	291	342	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009944	Biological Process	polarity specification of adaxial/abaxial axis
GO:0048481	Biological Process	plant ovule development
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence Send to blast
MPEKRLGTEY HGSKEGSYLP DLSLQISLPT SSKSSSAEPD DRGFDLWRKT QKSNGGAANP 60 SEGSTTSSER RCGDNTINLS LIHPSASSLA ESCNIRRMVE EAGRRFSTAV LTQRTGIDYG 120 TASLPIKGVP VYTCNSFLSV PYPEPRADGR SYLNVADKCI PDPKMVFCGK PAAEKQVPVF 180 SGYYQSINMP GSYNSSNVEL SLREHQHHQR QLESLLLLRN MQEGRREAGA NPAGVFNTAG 240 QTYLKRPGSI SEVLDSRRFI RAEAAGANFQ RSVRSRFMTK MPMKRSMRAP RMRWTSTLHA 300 HFVHAVELLG GHERATPKSV LELMNVKDLT LAHVKSHLQM YRTVKTTDKS TASPGKFNRR 360 L

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence Send to blast

MPEKRLGTEY HGSKEGSYLP DLSLQISLPT SSKSSSAEPD DRGFDLWRKT QKSNGGAANP  60
SEGSTTSSER RCGDNTINLS LIHPSASSLA ESCNIRRMVE EAGRRFSTAV LTQRTGIDYG  120
TASLPIKGVP VYTCNSFLSV PYPEPRADGR SYLNVADKCI PDPKMVFCGK PAAEKQVPVF  180
SGYYQSINMP GSYNSSNVEL SLREHQHHQR QLESLLLLRN MQEGRREAGA NPAGVFNTAG  240
QTYLKRPGSI SEVLDSRRFI RAEAAGANFQ RSVRSRFMTK MPMKRSMRAP RMRWTSTLHA  300
HFVHAVELLG GHERATPKSV LELMNVKDLT LAHVKSHLQM YRTVKTTDKS TASPGKFNRR  360
L

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	2e-16	291	345	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	2e-16	291	345	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	2e-16	291	345	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	2e-16	291	345	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	2e-16	291	345	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	2e-16	291	345	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	2e-16	291	345	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	2e-16	291	345	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	2e-16	291	345	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	2e-16	291	345	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	2e-16	291	345	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	2e-16	291	345	4	58	Protein PHOSPHATE STARVATION RESPONSE 1

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00174	DAP	Transfer from AT1G32240	Download

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP570	15	80

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	1e-43	G2-like family protein